RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 KIF20BQ96Q89 1820 aa24.96■■□□□ 1.59
TNFSF9-201ENST00000245817 TTC21BQ7Z4L5 1316 aa24.96■■□□□ 1.59
TNFSF9-201ENST00000245817 AKAP12Q02952 1782 aa24.95■■□□□ 1.59
TNFSF9-201ENST00000245817 USP6P35125 1406 aa24.95■■□□□ 1.59
TNFSF9-201ENST00000245817 FMN2Q9NZ56 1722 aa24.95■■□□□ 1.59
TNFSF9-201ENST00000245817 C19orf44Q9H6X5 657 aa24.95■■□□□ 1.58
TNFSF9-201ENST00000245817 MON2Q7Z3U7 1717 aa24.95■■□□□ 1.58
TNFSF9-201ENST00000245817 ANKRD26Q9UPS8 1709 aa24.94■■□□□ 1.58
TNFSF9-201ENST00000245817 XIRP1Q702N8 1843 aaKnown RBP24.93■■□□□ 1.58
TNFSF9-201ENST00000245817 SCAF1Q9H7N4 1312 aaKnown RBP24.93■■□□□ 1.58
TNFSF9-201ENST00000245817 CERKQ8TCT0 537 aa24.92■■□□□ 1.58
TNFSF9-201ENST00000245817 TTC21AQ8NDW8 1320 aa24.92■■□□□ 1.58
TNFSF9-201ENST00000245817 MSH6P52701 1360 aa24.92■■□□□ 1.58
TNFSF9-201ENST00000245817 PHF8Q9UPP1 1060 aa24.91■■□□□ 1.58
TNFSF9-201ENST00000245817 ESCO1Q5FWF5 840 aa24.91■■□□□ 1.58
TNFSF9-201ENST00000245817 BLMP54132 1417 aaPredicted RBP24.9■■□□□ 1.58
TNFSF9-201ENST00000245817 ATF3P18847 181 aa24.88■■□□□ 1.57
TNFSF9-201ENST00000245817 ZRANB1Q9UGI0 708 aa24.88■■□□□ 1.57
TNFSF9-201ENST00000245817 NUDCQ9Y266 331 aa24.88■■□□□ 1.57
TNFSF9-201ENST00000245817 RGPD8O14715 1765 aaPredicted RBP24.87■■□□□ 1.57
TNFSF9-201ENST00000245817 CADPS2Q86UW7 1296 aa24.86■■□□□ 1.57
TNFSF9-201ENST00000245817 SENP3-EIF4A1A0A087X0R7 540 aa24.85■■□□□ 1.57
TNFSF9-201ENST00000245817 PPM1GO15355 546 aaPredicted RBP24.85■■□□□ 1.57
TNFSF9-201ENST00000245817 IQSEC2Q5JU85 1478 aa24.85■■□□□ 1.57
TNFSF9-201ENST00000245817 AATKQ6ZMQ8 1374 aa24.85■■□□□ 1.57
TNFSF9-201ENST00000245817 SSH2Q76I76 1423 aa24.85■■□□□ 1.57
TNFSF9-201ENST00000245817 NRKQ7Z2Y5 1582 aa24.84■■□□□ 1.57
TNFSF9-201ENST00000245817 POLKQ9UBT6 870 aa24.84■■□□□ 1.57
TNFSF9-201ENST00000245817 SALL2Q9Y467 1007 aaPredicted RBP24.84■■□□□ 1.57
TNFSF9-201ENST00000245817 GTF3C3Q9Y5Q9 886 aa24.84■■□□□ 1.57
TNFSF9-201ENST00000245817 PSME1Q06323 249 aa24.83■■□□□ 1.57
TNFSF9-201ENST00000245817 DCCP43146 1447 aa24.82■■□□□ 1.56
TNFSF9-201ENST00000245817 PAK3O75914 559 aaPredicted RBP24.82■■□□□ 1.56
TNFSF9-201ENST00000245817 DIAPH1O60610 1272 aaKnown RBP24.81■■□□□ 1.56
TNFSF9-201ENST00000245817 U2AF1L5P0DN76 240 aaPredicted RBP24.8■■□□□ 1.56
TNFSF9-201ENST00000245817 U2AF1Q01081 240 aaKnown RBP eCLIP24.8■■□□□ 1.562e-9■■□□□ 13.9
TNFSF9-201ENST00000245817 CCDC146Q8IYE0 955 aa24.8■■□□□ 1.56
TNFSF9-201ENST00000245817 TOM1O60784 492 aa24.79■■□□□ 1.56
TNFSF9-201ENST00000245817 FBLN1P23142 703 aa24.79■■□□□ 1.56
TNFSF9-201ENST00000245817 U2SURPO15042 1029 aaKnown RBP24.78■■□□□ 1.56
TNFSF9-201ENST00000245817 ORAI2Q96SN7 254 aa24.78■■□□□ 1.56
TNFSF9-201ENST00000245817 OVOS2A0A0J9YW53 1432 aa24.78■■□□□ 1.56
TNFSF9-201ENST00000245817 OVOS2Q6IE36 1432 aa24.78■■□□□ 1.56
TNFSF9-201ENST00000245817 PNPLA6Q8IY17 1366 aa24.78■■□□□ 1.56
TNFSF9-201ENST00000245817 NLRP6P59044 892 aa24.78■■□□□ 1.56
TNFSF9-201ENST00000245817 PDE3BQ13370 1112 aa24.78■■□□□ 1.56
TNFSF9-201ENST00000245817 ABTB2Q8N961 1025 aa24.78■■□□□ 1.56
TNFSF9-201ENST00000245817 SLAIN2Q9P270 581 aa24.77■■□□□ 1.56
TNFSF9-201ENST00000245817 EMILIN1Q9Y6C2 1016 aa24.77■■□□□ 1.56
TNFSF9-201ENST00000245817 USP31Q70CQ4 1352 aa24.77■■□□□ 1.56
TNFSF9-201ENST00000245817 RRS1Q15050 365 aaKnown RBP24.76■■□□□ 1.55
TNFSF9-201ENST00000245817 C1orf167Q5SNV9 1468 aa24.76■■□□□ 1.55
TNFSF9-201ENST00000245817 UBAP1LF5GYI3 381 aa24.75■■□□□ 1.55
TNFSF9-201ENST00000245817 NGEFQ8N5V2 710 aa24.75■■□□□ 1.55
TNFSF9-201ENST00000245817 RUNDC1Q96C34 613 aa24.75■■□□□ 1.55
TNFSF9-201ENST00000245817 PNNQ9H307 717 aaKnown RBP24.75■■□□□ 1.55
TNFSF9-201ENST00000245817 SHPRHQ149N8 1683 aa24.74■■□□□ 1.55
TNFSF9-201ENST00000245817 APAF1O14727 1248 aa24.74■■□□□ 1.55
TNFSF9-201ENST00000245817 FOXO3O43524 673 aa24.74■■□□□ 1.55
TNFSF9-201ENST00000245817 SMG6Q86US8 1419 aaKnown RBP24.73■■□□□ 1.55
TNFSF9-201ENST00000245817 SOX12O15370 315 aa24.72■■□□□ 1.55
TNFSF9-201ENST00000245817 COL3A1P02461 1466 aaPredicted RBP24.72■■□□□ 1.55
TNFSF9-201ENST00000245817 MST1RQ04912 1400 aa24.72■■□□□ 1.55
TNFSF9-201ENST00000245817 CDK12Q9NYV4 1490 aaPredicted RBP24.71■■□□□ 1.55
TNFSF9-201ENST00000245817 MAP2P11137 1827 aaKnown RBP24.71■■□□□ 1.55
TNFSF9-201ENST00000245817 NUTM2GQ5VZR2 741 aa24.7■■□□□ 1.54
TNFSF9-201ENST00000245817 KRT28Q7Z3Y7 464 aa24.69■■□□□ 1.54
TNFSF9-201ENST00000245817 NEFLP07196 543 aa24.68■■□□□ 1.54
TNFSF9-201ENST00000245817 KIF1AQ12756 1690 aa24.67■■□□□ 1.54
TNFSF9-201ENST00000245817 NEFMP07197 916 aa24.67■■□□□ 1.54
TNFSF9-201ENST00000245817 PIP4K2BP78356 416 aa24.67■■□□□ 1.54
TNFSF9-201ENST00000245817 PIK3C2AO00443 1686 aa24.67■■□□□ 1.54
TNFSF9-201ENST00000245817 XPCQ01831 940 aaPredicted RBP24.66■■□□□ 1.54
TNFSF9-201ENST00000245817 TCP11L2Q8N4U5 519 aa24.66■■□□□ 1.54
TNFSF9-201ENST00000245817 MAPK8IP3Q9UPT6 1336 aa24.65■■□□□ 1.54
TNFSF9-201ENST00000245817 FCHSD2O94868 740 aa24.65■■□□□ 1.54
TNFSF9-201ENST00000245817 IL13P35225 146 aa24.65■■□□□ 1.54
TNFSF9-201ENST00000245817 AMPHP49418 695 aa24.65■■□□□ 1.54
TNFSF9-201ENST00000245817 LMOD2Q6P5Q4 547 aa24.64■■□□□ 1.53
TNFSF9-201ENST00000245817 SUPT16HQ9Y5B9 1047 aaKnown RBP24.64■■□□□ 1.53
TNFSF9-201ENST00000245817 GOLGA2Q08379 1002 aa24.63■■□□□ 1.53
TNFSF9-201ENST00000245817 BRINP3Q76B58 766 aa24.63■■□□□ 1.53
TNFSF9-201ENST00000245817 MAP3K19Q56UN5 1328 aa24.63■■□□□ 1.53
TNFSF9-201ENST00000245817 KCNH5Q8NCM2 988 aa24.62■■□□□ 1.53
TNFSF9-201ENST00000245817 NPHP3Q7Z494 1330 aa24.62■■□□□ 1.53
TNFSF9-201ENST00000245817 NEUROD2Q15784 382 aa24.62■■□□□ 1.53
TNFSF9-201ENST00000245817 SBNO1A3KN83 1393 aa24.61■■□□□ 1.53
TNFSF9-201ENST00000245817 CDCA7LQ96GN5 454 aa24.6■■□□□ 1.53
TNFSF9-201ENST00000245817 FLT4P35916 1363 aa24.6■■□□□ 1.53
TNFSF9-201ENST00000245817 ZNF521Q96K83 1311 aa24.6■■□□□ 1.53
TNFSF9-201ENST00000245817 NCBP3Q53F19 620 aaKnown RBP24.59■■□□□ 1.53
TNFSF9-201ENST00000245817 PLEKHF1Q96S99 279 aa24.59■■□□□ 1.53
TNFSF9-201ENST00000245817 RRP7AQ9Y3A4 280 aaKnown RBP24.59■■□□□ 1.53
TNFSF9-201ENST00000245817 KIF24Q5T7B8 1368 aa24.58■■□□□ 1.53
TNFSF9-201ENST00000245817 EIF4A2Q14240 407 aaKnown RBP24.58■■□□□ 1.53
TNFSF9-201ENST00000245817 HSP90AB2PQ58FF8 381 aa24.58■■□□□ 1.53
TNFSF9-201ENST00000245817 USP54Q70EL1 1684 aa24.57■■□□□ 1.52
TNFSF9-201ENST00000245817 HMOX1P09601 288 aa24.57■■□□□ 1.52
TNFSF9-201ENST00000245817 ROBO1Q9Y6N7 1651 aa24.57■■□□□ 1.52
TNFSF9-201ENST00000245817 PRKAR2BP31323 418 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms