RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 FNBP4Q8N3X1 1017 aaPredicted RBP19.44■□□□□ 0.7
VEGFA-201ENST00000230480 BCL9LQ86UU0 1499 aa19.43■□□□□ 0.7
VEGFA-201ENST00000230480 C8orf37Q96NL8 207 aa19.43■□□□□ 0.7
VEGFA-201ENST00000230480 PUS7Q96PZ0 661 aaKnown RBP19.43■□□□□ 0.7
VEGFA-201ENST00000230480 SLC12A5Q9H2X9 1139 aa19.43■□□□□ 0.7
VEGFA-201ENST00000230480 ARHGEF10O15013 1369 aa19.43■□□□□ 0.7
VEGFA-201ENST00000230480 NRKQ7Z2Y5 1582 aa19.42■□□□□ 0.7
VEGFA-201ENST00000230480 MEX3CQ5U5Q3 659 aaKnown RBP19.41■□□□□ 0.7
VEGFA-201ENST00000230480 MON2Q7Z3U7 1717 aa19.41■□□□□ 0.7
VEGFA-201ENST00000230480 ATAD2Q6PL18 1390 aa19.41■□□□□ 0.7
VEGFA-201ENST00000230480 SLIT2O94813 1529 aa19.41■□□□□ 0.7
VEGFA-201ENST00000230480 FAM83GA6ND36 823 aa19.4■□□□□ 0.7
VEGFA-201ENST00000230480 NUTM2GQ5VZR2 741 aa19.4■□□□□ 0.7
VEGFA-201ENST00000230480 LMOD2Q6P5Q4 547 aa19.4■□□□□ 0.7
VEGFA-201ENST00000230480 PHRF1Q9P1Y6 1649 aaKnown RBP19.4■□□□□ 0.7
VEGFA-201ENST00000230480 PIK3C2AO00443 1686 aa19.4■□□□□ 0.7
VEGFA-201ENST00000230480 PAK3O75914 559 aaPredicted RBP19.39■□□□□ 0.69
VEGFA-201ENST00000230480 PLEKHG5O94827 1062 aa19.39■□□□□ 0.69
VEGFA-201ENST00000230480 USP19O94966 1318 aa19.38■□□□□ 0.69
VEGFA-201ENST00000230480 NGLY1Q96IV0 654 aa19.38■□□□□ 0.69
VEGFA-201ENST00000230480 BRD4O60885 1362 aaPredicted RBP19.36■□□□□ 0.69
VEGFA-201ENST00000230480 TTC21BQ7Z4L5 1316 aa19.36■□□□□ 0.69
VEGFA-201ENST00000230480 HSPA5P11021 654 aaKnown RBP19.36■□□□□ 0.69
VEGFA-201ENST00000230480 ZRANB1Q9UGI0 708 aa19.36■□□□□ 0.69
VEGFA-201ENST00000230480 ATRNO75882 1429 aa19.35■□□□□ 0.69
VEGFA-201ENST00000230480 C11orf95C9JLR9 678 aaPredicted RBP19.35■□□□□ 0.69
VEGFA-201ENST00000230480 ZNF772Q68DY9 489 aaPredicted RBP19.35■□□□□ 0.69
VEGFA-201ENST00000230480 PLCH1Q4KWH8 1693 aa19.35■□□□□ 0.69
VEGFA-201ENST00000230480 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.34■□□□□ 0.69
VEGFA-201ENST00000230480 MYOM1P52179 1685 aa19.34■□□□□ 0.69
VEGFA-201ENST00000230480 ABTB2Q8N961 1025 aa19.34■□□□□ 0.69
VEGFA-201ENST00000230480 ZNF692Q9BU19 519 aaPredicted RBP19.34■□□□□ 0.69
VEGFA-201ENST00000230480 NRAPQ86VF7 1730 aa19.34■□□□□ 0.69
VEGFA-201ENST00000230480 A0A1W2PP64 1363 aa19.33■□□□□ 0.69
VEGFA-201ENST00000230480 QTRT2Q9H974 415 aaKnown RBP19.33■□□□□ 0.68
VEGFA-201ENST00000230480 USP21Q9UK80 565 aa19.33■□□□□ 0.68
VEGFA-201ENST00000230480 SLIT3O75094 1523 aa19.33■□□□□ 0.68
VEGFA-201ENST00000230480 KTN1Q86UP2 1357 aaKnown RBP19.32■□□□□ 0.68
VEGFA-201ENST00000230480 NWD2Q9ULI1 1742 aa19.31■□□□□ 0.68
VEGFA-201ENST00000230480 GLI3P10071 1580 aa19.31■□□□□ 0.68
VEGFA-201ENST00000230480 USP54Q70EL1 1684 aa19.3■□□□□ 0.68
VEGFA-201ENST00000230480 COL18A1P39060 1754 aa19.3■□□□□ 0.68
VEGFA-201ENST00000230480 TMF1P82094 1093 aa19.3■□□□□ 0.68
VEGFA-201ENST00000230480 TMC1Q8TDI8 760 aa19.3■□□□□ 0.68
VEGFA-201ENST00000230480 KIAA0232Q92628 1395 aa19.3■□□□□ 0.68
VEGFA-201ENST00000230480 COL14A1Q05707 1796 aaKnown RBP19.29■□□□□ 0.68
VEGFA-201ENST00000230480 GCP02774 474 aa19.29■□□□□ 0.68
VEGFA-201ENST00000230480 UNC5CLQ8IV45 518 aa19.29■□□□□ 0.68
VEGFA-201ENST00000230480 LMO7Q8WWI1 1683 aa19.29■□□□□ 0.68
VEGFA-201ENST00000230480 USP31Q70CQ4 1352 aa19.29■□□□□ 0.68
VEGFA-201ENST00000230480 ZC3H6P61129 1189 aaKnown RBP19.28■□□□□ 0.68
VEGFA-201ENST00000230480 EIF4G2P78344 907 aaKnown RBP eCLIP19.28■□□□□ 0.68
VEGFA-201ENST00000230480 NME9Q86XW9 330 aa19.28■□□□□ 0.68
VEGFA-201ENST00000230480 CARD14Q9BXL6 1004 aa19.28■□□□□ 0.68
VEGFA-201ENST00000230480 CAMTA1Q9Y6Y1 1673 aa19.27■□□□□ 0.68
VEGFA-201ENST00000230480 NLRP6P59044 892 aa19.27■□□□□ 0.68
VEGFA-201ENST00000230480 CHRNA2Q15822 529 aa19.27■□□□□ 0.68
VEGFA-201ENST00000230480 NLRP13Q86W25 1043 aa19.27■□□□□ 0.68
VEGFA-201ENST00000230480 CPDO75976 1380 aa19.27■□□□□ 0.68
VEGFA-201ENST00000230480 TTC21AQ8NDW8 1320 aa19.26■□□□□ 0.67
VEGFA-201ENST00000230480 SLC24A1O60721 1099 aa19.26■□□□□ 0.67
VEGFA-201ENST00000230480 RXRBP28702 533 aa19.26■□□□□ 0.67
VEGFA-201ENST00000230480 RBM6P78332 1123 aaKnown RBP19.26■□□□□ 0.67
VEGFA-201ENST00000230480 TRPC5Q9UL62 973 aaPredicted RBP19.26■□□□□ 0.67
VEGFA-201ENST00000230480 RGS12O14924 1447 aa19.25■□□□□ 0.67
VEGFA-201ENST00000230480 EDC4Q6P2E9 1401 aaKnown RBP19.25■□□□□ 0.67
VEGFA-201ENST00000230480 NFAT5O94916 1531 aa19.25■□□□□ 0.67
VEGFA-201ENST00000230480 CDK12Q9NYV4 1490 aaPredicted RBP19.25■□□□□ 0.67
VEGFA-201ENST00000230480 NINLQ9Y2I6 1382 aa19.25■□□□□ 0.67
VEGFA-201ENST00000230480 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.25■□□□□ 0.67
VEGFA-201ENST00000230480 ANKRD36BQ8N2N9 1353 aa19.24■□□□□ 0.67
VEGFA-201ENST00000230480 GJD4Q96KN9 370 aaPredicted RBP19.24■□□□□ 0.67
VEGFA-201ENST00000230480 BTG4Q9NY30 223 aa19.24■□□□□ 0.67
VEGFA-201ENST00000230480 HAP1P54257 671 aaPredicted RBP19.23■□□□□ 0.67
VEGFA-201ENST00000230480 VPS72Q15906 364 aa19.23■□□□□ 0.67
VEGFA-201ENST00000230480 RGPD5Q99666 1765 aa19.23■□□□□ 0.67
VEGFA-201ENST00000230480 OVOS2A0A0J9YW53 1432 aa19.23■□□□□ 0.67
VEGFA-201ENST00000230480 OVOS2Q6IE36 1432 aa19.23■□□□□ 0.67
VEGFA-201ENST00000230480 TERF2IPQ9NYB0 399 aa19.22■□□□□ 0.67
VEGFA-201ENST00000230480 AXIN2Q9Y2T1 843 aa19.22■□□□□ 0.67
VEGFA-201ENST00000230480 HDGFL2Q7Z4V5 671 aaPredicted RBP19.21■□□□□ 0.67
VEGFA-201ENST00000230480 ARHGEF25Q86VW2 580 aa19.21■□□□□ 0.67
VEGFA-201ENST00000230480 PRDM11Q9NQV5 511 aa19.21■□□□□ 0.67
VEGFA-201ENST00000230480 ONECUT3O60422 494 aaPredicted RBP19.2■□□□□ 0.66
VEGFA-201ENST00000230480 FBLN1P23142 703 aa19.2■□□□□ 0.66
VEGFA-201ENST00000230480 BRWD3Q6RI45 1802 aa19.2■□□□□ 0.66
VEGFA-201ENST00000230480 FYB1O15117 783 aa19.19■□□□□ 0.66
VEGFA-201ENST00000230480 CDCA8Q53HL2 280 aa19.17■□□□□ 0.66
VEGFA-201ENST00000230480 SPATA31A5Q5VU36 1347 aa19.17■□□□□ 0.66
VEGFA-201ENST00000230480 SPATA31A7Q8IWB4 1347 aa19.17■□□□□ 0.66
VEGFA-201ENST00000230480 AATKQ6ZMQ8 1374 aa19.17■□□□□ 0.66
VEGFA-201ENST00000230480 COL5A2P05997 1499 aaPredicted RBP19.16■□□□□ 0.66
VEGFA-201ENST00000230480 KIF7Q2M1P5 1343 aa19.15■□□□□ 0.66
VEGFA-201ENST00000230480 LTN1O94822 1766 aa19.14■□□□□ 0.66
VEGFA-201ENST00000230480 LARP1Q6PKG0 1096 aaKnown RBP19.14■□□□□ 0.65
VEGFA-201ENST00000230480 SOX12O15370 315 aa19.13■□□□□ 0.65
VEGFA-201ENST00000230480 SPATA31A1Q5TZJ5 1347 aa19.13■□□□□ 0.65
VEGFA-201ENST00000230480 KIF20BQ96Q89 1820 aa19.13■□□□□ 0.65
VEGFA-201ENST00000230480 THSD7AQ9UPZ6 1657 aa19.12■□□□□ 0.65
VEGFA-201ENST00000230480 KCNH5Q8NCM2 988 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms