RNA–Protein interactions for RNA: ENST00000229384.5

GATC-201, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-201ENST00000229384 PLEKHG3A1L390 1219 aa21.5■■□□□ 1.03
GATC-201ENST00000229384 HAP1P54257 671 aaPredicted RBP21.5■■□□□ 1.03
GATC-201ENST00000229384 NEUROD1Q13562 356 aa21.5■■□□□ 1.03
GATC-201ENST00000229384 CCDC61Q9Y6R9 512 aa21.5■■□□□ 1.03
GATC-201ENST00000229384 COL14A1Q05707 1796 aaKnown RBP21.5■■□□□ 1.03
GATC-201ENST00000229384 CENPJQ9HC77 1338 aaPredicted RBP21.5■■□□□ 1.03
GATC-201ENST00000229384 PHRF1Q9P1Y6 1649 aaKnown RBP21.48■■□□□ 1.03
GATC-201ENST00000229384 VPS72Q15906 364 aa21.48■■□□□ 1.03
GATC-201ENST00000229384 ACEP12821 1306 aa21.48■■□□□ 1.03
GATC-201ENST00000229384 ATAD2Q6PL18 1390 aa21.48■■□□□ 1.03
GATC-201ENST00000229384 NBPF8Q3BBV2 869 aa21.47■■□□□ 1.03
GATC-201ENST00000229384 PAK3O75914 559 aaPredicted RBP21.45■■□□□ 1.02
GATC-201ENST00000229384 ONECUT3O60422 494 aaPredicted RBP21.44■■□□□ 1.02
GATC-201ENST00000229384 CABP2Q9NPB3 220 aa21.43■■□□□ 1.02
GATC-201ENST00000229384 PPIP5K1Q6PFW1 1433 aa21.43■■□□□ 1.02
GATC-201ENST00000229384 EP400Q96L91 3159 aa21.42■■□□□ 1.02
GATC-201ENST00000229384 SRPK2P78362 688 aaKnown RBP21.41■■□□□ 1.02
GATC-201ENST00000229384 BTG4Q9NY30 223 aa21.41■■□□□ 1.02
GATC-201ENST00000229384 ROCK2O75116 1388 aaKnown RBP21.4■■□□□ 1.02
GATC-201ENST00000229384 NUTM2GQ5VZR2 741 aa21.39■■□□□ 1.01
GATC-201ENST00000229384 NRKQ7Z2Y5 1582 aa21.39■■□□□ 1.01
GATC-201ENST00000229384 SEPT12Q8IYM1 358 aa21.38■■□□□ 1.01
GATC-201ENST00000229384 KIAA0232Q92628 1395 aa21.37■■□□□ 1.01
GATC-201ENST00000229384 AKAP12Q02952 1782 aa21.37■■□□□ 1.01
GATC-201ENST00000229384 USP19O94966 1318 aa21.36■■□□□ 1.01
GATC-201ENST00000229384 TRIM26Q12899 539 aaPredicted RBP21.36■■□□□ 1.01
GATC-201ENST00000229384 CABP1Q9NZU7 370 aa21.36■■□□□ 1.01
GATC-201ENST00000229384 PRDM11Q9NQV5 511 aa21.35■■□□□ 1.01
GATC-201ENST00000229384 CCDC9Q9Y3X0 531 aaKnown RBP21.35■■□□□ 1.01
GATC-201ENST00000229384 SSH2Q76I76 1423 aa21.35■■□□□ 1.01
GATC-201ENST00000229384 LMO7Q8WWI1 1683 aa21.34■■□□□ 1.01
GATC-201ENST00000229384 EVC2Q86UK5 1308 aa21.34■■□□□ 1.01
GATC-201ENST00000229384 ABTB2Q8N961 1025 aa21.34■■□□□ 1.01
GATC-201ENST00000229384 USP6P35125 1406 aa21.34■■□□□ 1.01
GATC-201ENST00000229384 THSD7AQ9UPZ6 1657 aa21.34■■□□□ 1.01
GATC-201ENST00000229384 SPATA31A5Q5VU36 1347 aa21.33■■□□□ 1.01
GATC-201ENST00000229384 SPATA31A7Q8IWB4 1347 aa21.33■■□□□ 1.01
GATC-201ENST00000229384 CHRNA2Q15822 529 aa21.33■■□□□ 1.01
GATC-201ENST00000229384 CCDC125Q86Z20 511 aa21.33■■□□□ 1.01
GATC-201ENST00000229384 BRD4O60885 1362 aaPredicted RBP21.33■■□□□ 1
GATC-201ENST00000229384 PIK3C2AO00443 1686 aa21.32■■□□□ 1
GATC-201ENST00000229384 ZC3H6P61129 1189 aaKnown RBP21.32■■□□□ 1
GATC-201ENST00000229384 CAMTA1Q9Y6Y1 1673 aa21.31■■□□□ 1
GATC-201ENST00000229384 FAM98CQ17RN3 349 aaKnown RBP21.31■■□□□ 1
GATC-201ENST00000229384 CPDO75976 1380 aa21.31■■□□□ 1
GATC-201ENST00000229384 SBNO2Q9Y2G9 1366 aa21.29■■□□□ 1
GATC-201ENST00000229384 KRT27Q7Z3Y8 459 aa21.29■■□□□ 1
GATC-201ENST00000229384 SLIT3O75094 1523 aa21.29■■□□□ 1
GATC-201ENST00000229384 BLMP54132 1417 aaPredicted RBP21.29■■□□□ 1
GATC-201ENST00000229384 GCP02774 474 aa21.28■■□□□ 1
GATC-201ENST00000229384 NLRP13Q86W25 1043 aa21.28■■□□□ 1
GATC-201ENST00000229384 SPATA31A1Q5TZJ5 1347 aa21.28■■□□□ 1
GATC-201ENST00000229384 TONSLQ96HA7 1378 aa21.27■■□□□ 1
GATC-201ENST00000229384 COL18A1P39060 1754 aa21.27■■□□□ 1
GATC-201ENST00000229384 CPSF1Q10570 1443 aaKnown RBP21.27■■□□□ 1
GATC-201ENST00000229384 MON2Q7Z3U7 1717 aa21.26■□□□□ 0.99
GATC-201ENST00000229384 CARD11Q9BXL7 1154 aa21.26■□□□□ 0.99
GATC-201ENST00000229384 STRN4Q9NRL3 753 aa21.24■□□□□ 0.99
GATC-201ENST00000229384 TTC21BQ7Z4L5 1316 aa21.23■□□□□ 0.99
GATC-201ENST00000229384 RGPD5Q99666 1765 aa21.23■□□□□ 0.99
GATC-201ENST00000229384 CD163L1Q9NR16 1453 aa21.22■□□□□ 0.99
GATC-201ENST00000229384 NLRP6P59044 892 aa21.22■□□□□ 0.99
GATC-201ENST00000229384 ZNF692Q9BU19 519 aaPredicted RBP21.22■□□□□ 0.99
GATC-201ENST00000229384 LARP1Q6PKG0 1096 aaKnown RBP21.21■□□□□ 0.99
GATC-201ENST00000229384 DEFB132Q7Z7B7 95 aa21.21■□□□□ 0.99
GATC-201ENST00000229384 COL5A2P05997 1499 aaPredicted RBP21.2■□□□□ 0.98
GATC-201ENST00000229384 A0A0G2JS52 829 aa21.2■□□□□ 0.98
GATC-201ENST00000229384 MYT1Q01538 1121 aa21.2■□□□□ 0.98
GATC-201ENST00000229384 USP54Q70EL1 1684 aa21.19■□□□□ 0.98
GATC-201ENST00000229384 RGPD1P0DJD0 1748 aa21.19■□□□□ 0.98
GATC-201ENST00000229384 FAM182BQ5T319 152 aa21.19■□□□□ 0.98
GATC-201ENST00000229384 TNS1Q9HBL0 1735 aaKnown RBP21.18■□□□□ 0.98
GATC-201ENST00000229384 EVA1CP58658 441 aa21.18■□□□□ 0.98
GATC-201ENST00000229384 BARGINQ6ZT62 677 aa21.18■□□□□ 0.98
GATC-201ENST00000229384 AATKQ6ZMQ8 1374 aa21.18■□□□□ 0.98
GATC-201ENST00000229384 TTC21AQ8NDW8 1320 aa21.17■□□□□ 0.98
GATC-201ENST00000229384 NFAT5O94916 1531 aa21.16■□□□□ 0.98
GATC-201ENST00000229384 KTN1Q86UP2 1357 aaKnown RBP21.16■□□□□ 0.98
GATC-201ENST00000229384 TESK2Q96S53 571 aa21.16■□□□□ 0.98
GATC-201ENST00000229384 USP35Q9P2H5 1018 aa21.16■□□□□ 0.98
GATC-201ENST00000229384 PARP4Q9UKK3 1724 aaKnown RBP21.15■□□□□ 0.98
GATC-201ENST00000229384 WNK3Q9BYP7 1800 aa21.14■□□□□ 0.97
GATC-201ENST00000229384 ARHGEF25Q86VW2 580 aa21.14■□□□□ 0.97
GATC-201ENST00000229384 TCP11L2Q8N4U5 519 aa21.14■□□□□ 0.97
GATC-201ENST00000229384 ZRANB1Q9UGI0 708 aa21.14■□□□□ 0.97
GATC-201ENST00000229384 AXIN2Q9Y2T1 843 aa21.14■□□□□ 0.97
GATC-201ENST00000229384 PUS7Q96PZ0 661 aaKnown RBP21.13■□□□□ 0.97
GATC-201ENST00000229384 SLC12A5Q9H2X9 1139 aa21.13■□□□□ 0.97
GATC-201ENST00000229384 CRB1P82279 1406 aa21.12■□□□□ 0.97
GATC-201ENST00000229384 USP31Q70CQ4 1352 aa21.12■□□□□ 0.97
GATC-201ENST00000229384 SF3B2Q13435 895 aaKnown RBP21.12■□□□□ 0.97
GATC-201ENST00000229384 ST20-MTHFSA0A0A6YYL1 179 aa21.11■□□□□ 0.97
GATC-201ENST00000229384 THRAP3Q9Y2W1 955 aaKnown RBP21.11■□□□□ 0.97
GATC-201ENST00000229384 ZBTB7CA1YPR0 619 aa21.1■□□□□ 0.97
GATC-201ENST00000229384 KCNH5Q8NCM2 988 aa21.09■□□□□ 0.97
GATC-201ENST00000229384 LTN1O94822 1766 aa21.09■□□□□ 0.97
GATC-201ENST00000229384 DISP2A7MBM2 1401 aa21.09■□□□□ 0.97
GATC-201ENST00000229384 PEAK1Q9H792 1746 aa21.09■□□□□ 0.97
GATC-201ENST00000229384 SBF2Q86WG5 1849 aa21.08■□□□□ 0.97
GATC-201ENST00000229384 NME9Q86XW9 330 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms