RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 COL22A1Q8NFW1 1626 aaPredicted RBP20.49■□□□□ 0.87
PCOLCE-201ENST00000223061 NUTM2GQ5VZR2 741 aa20.49■□□□□ 0.87
PCOLCE-201ENST00000223061 HAP1P54257 671 aaPredicted RBP20.48■□□□□ 0.87
PCOLCE-201ENST00000223061 POLR3GLQ9BT43 218 aa20.48■□□□□ 0.87
PCOLCE-201ENST00000223061 ZNF692Q9BU19 519 aaPredicted RBP20.48■□□□□ 0.87
PCOLCE-201ENST00000223061 KTN1Q86UP2 1357 aaKnown RBP20.48■□□□□ 0.87
PCOLCE-201ENST00000223061 CPSF1Q10570 1443 aaKnown RBP20.47■□□□□ 0.87
PCOLCE-201ENST00000223061 HDGFL2Q7Z4V5 671 aaPredicted RBP20.47■□□□□ 0.87
PCOLCE-201ENST00000223061 ABTB2Q8N961 1025 aa20.47■□□□□ 0.87
PCOLCE-201ENST00000223061 TERF2IPQ9NYB0 399 aa20.47■□□□□ 0.87
PCOLCE-201ENST00000223061 C8orf37Q96NL8 207 aa20.46■□□□□ 0.87
PCOLCE-201ENST00000223061 NINLQ9Y2I6 1382 aa20.46■□□□□ 0.87
PCOLCE-201ENST00000223061 CD163L1Q9NR16 1453 aa20.46■□□□□ 0.87
PCOLCE-201ENST00000223061 ALS2Q96Q42 1657 aa20.46■□□□□ 0.87
PCOLCE-201ENST00000223061 A0A1W2PP64 1363 aa20.44■□□□□ 0.86
PCOLCE-201ENST00000223061 BRD4O60885 1362 aaPredicted RBP20.44■□□□□ 0.86
PCOLCE-201ENST00000223061 SSH2Q76I76 1423 aa20.44■□□□□ 0.86
PCOLCE-201ENST00000223061 TTC21BQ7Z4L5 1316 aa20.43■□□□□ 0.86
PCOLCE-201ENST00000223061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.42■□□□□ 0.86
PCOLCE-201ENST00000223061 NGLY1Q96IV0 654 aa20.41■□□□□ 0.86
PCOLCE-201ENST00000223061 AKAP12Q02952 1782 aa20.41■□□□□ 0.86
PCOLCE-201ENST00000223061 C11orf95C9JLR9 678 aaPredicted RBP20.41■□□□□ 0.86
PCOLCE-201ENST00000223061 RGS17Q9UGC6 210 aaPredicted RBP20.41■□□□□ 0.86
PCOLCE-201ENST00000223061 NLRP6P59044 892 aa20.4■□□□□ 0.86
PCOLCE-201ENST00000223061 NLRP13Q86W25 1043 aa20.39■□□□□ 0.86
PCOLCE-201ENST00000223061 AFF2P51816 1311 aa20.39■□□□□ 0.85
PCOLCE-201ENST00000223061 TTC21AQ8NDW8 1320 aa20.39■□□□□ 0.85
PCOLCE-201ENST00000223061 ANKRD36BQ8N2N9 1353 aa20.39■□□□□ 0.85
PCOLCE-201ENST00000223061 EDC4Q6P2E9 1401 aaKnown RBP20.38■□□□□ 0.85
PCOLCE-201ENST00000223061 MON2Q7Z3U7 1717 aa20.38■□□□□ 0.85
PCOLCE-201ENST00000223061 NRKQ7Z2Y5 1582 aa20.37■□□□□ 0.85
PCOLCE-201ENST00000223061 NME9Q86XW9 330 aa20.37■□□□□ 0.85
PCOLCE-201ENST00000223061 ABCA3Q99758 1704 aa20.37■□□□□ 0.85
PCOLCE-201ENST00000223061 PIK3C2AO00443 1686 aa20.36■□□□□ 0.85
PCOLCE-201ENST00000223061 USP19O94966 1318 aa20.36■□□□□ 0.85
PCOLCE-201ENST00000223061 ZNF772Q68DY9 489 aaPredicted RBP20.35■□□□□ 0.85
PCOLCE-201ENST00000223061 ZRANB1Q9UGI0 708 aa20.35■□□□□ 0.85
PCOLCE-201ENST00000223061 MYOM1P52179 1685 aa20.34■□□□□ 0.85
PCOLCE-201ENST00000223061 KIF7Q2M1P5 1343 aa20.34■□□□□ 0.85
PCOLCE-201ENST00000223061 ZEB1P37275 1124 aaPredicted RBP20.34■□□□□ 0.85
PCOLCE-201ENST00000223061 ZC3H6P61129 1189 aaKnown RBP20.34■□□□□ 0.85
PCOLCE-201ENST00000223061 POTEAQ6S8J7 498 aa20.33■□□□□ 0.85
PCOLCE-201ENST00000223061 USP21Q9UK80 565 aa20.33■□□□□ 0.85
PCOLCE-201ENST00000223061 CRYBG1Q9Y4K1 1723 aa20.33■□□□□ 0.84
PCOLCE-201ENST00000223061 FAM83GA6ND36 823 aa20.33■□□□□ 0.84
PCOLCE-201ENST00000223061 SOX12O15370 315 aa20.33■□□□□ 0.84
PCOLCE-201ENST00000223061 GCP02774 474 aa20.33■□□□□ 0.84
PCOLCE-201ENST00000223061 FNBP4Q8N3X1 1017 aaPredicted RBP20.33■□□□□ 0.84
PCOLCE-201ENST00000223061 PRDM11Q9NQV5 511 aa20.33■□□□□ 0.84
PCOLCE-201ENST00000223061 KIAA0232Q92628 1395 aa20.32■□□□□ 0.84
PCOLCE-201ENST00000223061 PHRF1Q9P1Y6 1649 aaKnown RBP20.32■□□□□ 0.84
PCOLCE-201ENST00000223061 CARD14Q9BXL6 1004 aa20.32■□□□□ 0.84
PCOLCE-201ENST00000223061 MARF1Q9Y4F3 1742 aaKnown RBP20.3■□□□□ 0.84
PCOLCE-201ENST00000223061 ZBTB7CA1YPR0 619 aa20.3■□□□□ 0.84
PCOLCE-201ENST00000223061 CHRNA2Q15822 529 aa20.3■□□□□ 0.84
PCOLCE-201ENST00000223061 NSD3Q9BZ95 1437 aa20.3■□□□□ 0.84
PCOLCE-201ENST00000223061 USP31Q70CQ4 1352 aa20.29■□□□□ 0.84
PCOLCE-201ENST00000223061 SLIT3O75094 1523 aa20.29■□□□□ 0.84
PCOLCE-201ENST00000223061 PANK3Q9H999 370 aa20.28■□□□□ 0.84
PCOLCE-201ENST00000223061 BCL9LQ86UU0 1499 aa20.28■□□□□ 0.84
PCOLCE-201ENST00000223061 SLIT2O94813 1529 aa20.28■□□□□ 0.84
PCOLCE-201ENST00000223061 ILDR2Q71H61 639 aa20.27■□□□□ 0.84
PCOLCE-201ENST00000223061 QTRT2Q9H974 415 aaKnown RBP20.27■□□□□ 0.84
PCOLCE-201ENST00000223061 KCNH5Q8NCM2 988 aa20.27■□□□□ 0.83
PCOLCE-201ENST00000223061 BTG4Q9NY30 223 aa20.27■□□□□ 0.83
PCOLCE-201ENST00000223061 CCDC7Q96M83 1385 aa20.27■□□□□ 0.83
PCOLCE-201ENST00000223061 WASHC2AQ641Q2 1341 aa20.26■□□□□ 0.83
PCOLCE-201ENST00000223061 CPDO75976 1380 aa20.26■□□□□ 0.83
PCOLCE-201ENST00000223061 UNC5CLQ8IV45 518 aa20.26■□□□□ 0.83
PCOLCE-201ENST00000223061 GGNBP2Q9H3C7 697 aa20.26■□□□□ 0.83
PCOLCE-201ENST00000223061 FYB1O15117 783 aa20.25■□□□□ 0.83
PCOLCE-201ENST00000223061 COG3Q96JB2 828 aa20.25■□□□□ 0.83
PCOLCE-201ENST00000223061 TRPC5Q9UL62 973 aaPredicted RBP20.25■□□□□ 0.83
PCOLCE-201ENST00000223061 OVOS2A0A0J9YW53 1432 aa20.25■□□□□ 0.83
PCOLCE-201ENST00000223061 OVOS2Q6IE36 1432 aa20.25■□□□□ 0.83
PCOLCE-201ENST00000223061 COL14A1Q05707 1796 aaKnown RBP20.24■□□□□ 0.83
PCOLCE-201ENST00000223061 PLCH1Q4KWH8 1693 aa20.23■□□□□ 0.83
PCOLCE-201ENST00000223061 ATRNO75882 1429 aa20.22■□□□□ 0.83
PCOLCE-201ENST00000223061 RXRBP28702 533 aa20.22■□□□□ 0.83
PCOLCE-201ENST00000223061 CGNL1Q0VF96 1302 aa20.22■□□□□ 0.83
PCOLCE-201ENST00000223061 NFAT5O94916 1531 aa20.21■□□□□ 0.83
PCOLCE-201ENST00000223061 ARHGEF25Q86VW2 580 aa20.21■□□□□ 0.83
PCOLCE-201ENST00000223061 CCDC9Q9Y3X0 531 aaKnown RBP20.21■□□□□ 0.83
PCOLCE-201ENST00000223061 USP54Q70EL1 1684 aa20.2■□□□□ 0.82
PCOLCE-201ENST00000223061 STRN4Q9NRL3 753 aa20.2■□□□□ 0.82
PCOLCE-201ENST00000223061 RBM6P78332 1123 aaKnown RBP20.19■□□□□ 0.82
PCOLCE-201ENST00000223061 NWD2Q9ULI1 1742 aa20.19■□□□□ 0.82
PCOLCE-201ENST00000223061 VPS72Q15906 364 aa20.19■□□□□ 0.82
PCOLCE-201ENST00000223061 AATKQ6ZMQ8 1374 aa20.18■□□□□ 0.82
PCOLCE-201ENST00000223061 FBLN1P23142 703 aa20.18■□□□□ 0.82
PCOLCE-201ENST00000223061 EVA1CP58658 441 aa20.18■□□□□ 0.82
PCOLCE-201ENST00000223061 GJD4Q96KN9 370 aaPredicted RBP20.18■□□□□ 0.82
PCOLCE-201ENST00000223061 KNSTRNQ9Y448 316 aa20.17■□□□□ 0.82
PCOLCE-201ENST00000223061 CAMTA1Q9Y6Y1 1673 aa20.17■□□□□ 0.82
PCOLCE-201ENST00000223061 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.16■□□□□ 0.82
PCOLCE-201ENST00000223061 KIF20BQ96Q89 1820 aa20.16■□□□□ 0.82
PCOLCE-201ENST00000223061 NRAPQ86VF7 1730 aa20.16■□□□□ 0.82
PCOLCE-201ENST00000223061 AXIN2Q9Y2T1 843 aa20.16■□□□□ 0.82
PCOLCE-201ENST00000223061 LMO7Q8WWI1 1683 aa20.15■□□□□ 0.82
PCOLCE-201ENST00000223061 LARP1Q6PKG0 1096 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms