RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 STAC3Q96MF2 364 aa17.13■□□□□ 0.33
SNU13-201ENST00000215956 ANKARQ7Z5J8 1434 aa17.12■□□□□ 0.33
SNU13-201ENST00000215956 EN1Q05925 392 aaPredicted RBP17.11■□□□□ 0.33
SNU13-201ENST00000215956 C14orf93Q9H972 538 aaKnown RBP17.11■□□□□ 0.33
SNU13-201ENST00000215956 BTG4Q9NY30 223 aa17.11■□□□□ 0.33
SNU13-201ENST00000215956 ADGRB2O60241 1585 aa17.11■□□□□ 0.33
SNU13-201ENST00000215956 THSD7AQ9UPZ6 1657 aa17.11■□□□□ 0.33
SNU13-201ENST00000215956 SAFB2Q14151 953 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNU13-201ENST00000215956 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
SNU13-201ENST00000215956 PRAM1Q96QH2 718 aa17.1■□□□□ 0.33
SNU13-201ENST00000215956 CRYBG1Q9Y4K1 1723 aa17.1■□□□□ 0.33
SNU13-201ENST00000215956 DISP2A7MBM2 1401 aa17.09■□□□□ 0.33
SNU13-201ENST00000215956 DLC1Q96QB1 1528 aa17.09■□□□□ 0.33
SNU13-201ENST00000215956 CFAP70Q5T0N1 1121 aa17.08■□□□□ 0.32
SNU13-201ENST00000215956 R3HDM1Q15032 1099 aaKnown RBP17.07■□□□□ 0.32
SNU13-201ENST00000215956 FAM182BQ5T319 152 aa17.07■□□□□ 0.32
SNU13-201ENST00000215956 NBPF8Q3BBV2 869 aa17.07■□□□□ 0.32
SNU13-201ENST00000215956 SPATA31A5Q5VU36 1347 aa17.06■□□□□ 0.32
SNU13-201ENST00000215956 SPATA31A7Q8IWB4 1347 aa17.06■□□□□ 0.32
SNU13-201ENST00000215956 DCAF11Q8TEB1 546 aa17.06■□□□□ 0.32
SNU13-201ENST00000215956 GPRASP1Q5JY77 1395 aa17.05■□□□□ 0.32
SNU13-201ENST00000215956 POGKQ9P215 609 aa17.05■□□□□ 0.32
SNU13-201ENST00000215956 HSPA5P11021 654 aaKnown RBP17.03■□□□□ 0.32
SNU13-201ENST00000215956 TULP4Q9NRJ4 1543 aa17.03■□□□□ 0.32
SNU13-201ENST00000215956 EZH2Q15910 746 aaKnown RBP17.03■□□□□ 0.32
SNU13-201ENST00000215956 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.32
SNU13-201ENST00000215956 ADGRB1O14514 1584 aa17.02■□□□□ 0.32
SNU13-201ENST00000215956 HIRIP3Q9BW71 556 aaPredicted RBP17.01■□□□□ 0.31
SNU13-201ENST00000215956 PRR36Q9H6K5 1346 aa17.01■□□□□ 0.31
SNU13-201ENST00000215956 RREB1Q92766 1687 aa17■□□□□ 0.31
SNU13-201ENST00000215956 PHRF1Q9P1Y6 1649 aaKnown RBP17■□□□□ 0.31
SNU13-201ENST00000215956 PRDM11Q9NQV5 511 aa17■□□□□ 0.31
SNU13-201ENST00000215956 ITSN1Q15811 1721 aa17■□□□□ 0.31
SNU13-201ENST00000215956 KDM2AQ9Y2K7 1162 aa16.99■□□□□ 0.31
SNU13-201ENST00000215956 SPATA31A1Q5TZJ5 1347 aa16.99■□□□□ 0.31
SNU13-201ENST00000215956 TRIM37O94972 964 aa16.99■□□□□ 0.31
SNU13-201ENST00000215956 CAMKK2Q96RR4 588 aa16.99■□□□□ 0.31
SNU13-201ENST00000215956 NUP188Q5SRE5 1749 aa16.99■□□□□ 0.31
SNU13-201ENST00000215956 PARD3Q8TEW0 1356 aa16.98■□□□□ 0.31
SNU13-201ENST00000215956 MINK1Q8N4C8 1332 aaPredicted RBP16.98■□□□□ 0.31
SNU13-201ENST00000215956 TRAK1Q9UPV9 953 aa16.98■□□□□ 0.31
SNU13-201ENST00000215956 PAK3O75914 559 aaPredicted RBP16.97■□□□□ 0.31
SNU13-201ENST00000215956 FAM196AQ6ZSG2 479 aa16.97■□□□□ 0.31
SNU13-201ENST00000215956 CARD11Q9BXL7 1154 aa16.97■□□□□ 0.31
SNU13-201ENST00000215956 KIAA0232Q92628 1395 aa16.97■□□□□ 0.31
SNU13-201ENST00000215956 NGDNQ8NEJ9 315 aaKnown RBP16.96■□□□□ 0.31
SNU13-201ENST00000215956 ROCK2O75116 1388 aaKnown RBP16.96■□□□□ 0.31
SNU13-201ENST00000215956 USP47Q96K76 1375 aa16.96■□□□□ 0.31
SNU13-201ENST00000215956 WASLO00401 505 aaPredicted RBP16.96■□□□□ 0.3
SNU13-201ENST00000215956 APBA3O96018 575 aa16.95■□□□□ 0.3
SNU13-201ENST00000215956 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
SNU13-201ENST00000215956 ATP7BP35670 1465 aa16.94■□□□□ 0.3
SNU13-201ENST00000215956 CHRNA2Q15822 529 aa16.94■□□□□ 0.3
SNU13-201ENST00000215956 ARHGEF28Q8N1W1 1705 aaKnown RBP16.93■□□□□ 0.3
SNU13-201ENST00000215956 DDX10Q13206 875 aaKnown RBP16.93■□□□□ 0.3
SNU13-201ENST00000215956 MIER1Q8N108 512 aa16.93■□□□□ 0.3
SNU13-201ENST00000215956 YY1P25490 414 aa16.92■□□□□ 0.3
SNU13-201ENST00000215956 SSH2Q76I76 1423 aa16.91■□□□□ 0.3
SNU13-201ENST00000215956 USP35Q9P2H5 1018 aa16.91■□□□□ 0.3
SNU13-201ENST00000215956 NRKQ7Z2Y5 1582 aa16.91■□□□□ 0.3
SNU13-201ENST00000215956 ZC3H6P61129 1189 aaKnown RBP16.9■□□□□ 0.3
SNU13-201ENST00000215956 BARGINQ6ZT62 677 aa16.9■□□□□ 0.3
SNU13-201ENST00000215956 TOPAZ1Q8N9V7 1692 aa16.9■□□□□ 0.3
SNU13-201ENST00000215956 PDE3BQ13370 1112 aa16.89■□□□□ 0.29
SNU13-201ENST00000215956 TRPM1Q7Z4N2 1603 aa16.89■□□□□ 0.29
SNU13-201ENST00000215956 NBPF14Q5TI25 921 aa16.88■□□□□ 0.29
SNU13-201ENST00000215956 LMO7Q8WWI1 1683 aa16.88■□□□□ 0.29
SNU13-201ENST00000215956 CCDC7Q96M83 1385 aa16.88■□□□□ 0.29
SNU13-201ENST00000215956 CAMTA1Q9Y6Y1 1673 aa16.88■□□□□ 0.29
SNU13-201ENST00000215956 ANP32CO43423 234 aa16.88■□□□□ 0.29
SNU13-201ENST00000215956 EVA1CP58658 441 aa16.88■□□□□ 0.29
SNU13-201ENST00000215956 PARP4Q9UKK3 1724 aaKnown RBP16.88■□□□□ 0.29
SNU13-201ENST00000215956 NUTM2GQ5VZR2 741 aa16.87■□□□□ 0.29
SNU13-201ENST00000215956 NUDT16Q96DE0 195 aaKnown RBP16.87■□□□□ 0.29
SNU13-201ENST00000215956 WASHC2AQ641Q2 1341 aa16.87■□□□□ 0.29
SNU13-201ENST00000215956 RGPD3A6NKT7 1758 aaPredicted RBP16.86■□□□□ 0.29
SNU13-201ENST00000215956 RGPD4Q7Z3J3 1758 aa16.86■□□□□ 0.29
SNU13-201ENST00000215956 LARP1Q6PKG0 1096 aaKnown RBP16.85■□□□□ 0.29
SNU13-201ENST00000215956 TCP11L2Q8N4U5 519 aa16.85■□□□□ 0.29
SNU13-201ENST00000215956 PPP1R1BQ9UD71 204 aaPredicted RBP16.85■□□□□ 0.29
SNU13-201ENST00000215956 POLR3AO14802 1390 aaPredicted RBP16.85■□□□□ 0.29
SNU13-201ENST00000215956 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
SNU13-201ENST00000215956 SPON1Q9HCB6 807 aa16.85■□□□□ 0.29
SNU13-201ENST00000215956 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
SNU13-201ENST00000215956 SBF2Q86WG5 1849 aa16.84■□□□□ 0.29
SNU13-201ENST00000215956 CPDO75976 1380 aa16.84■□□□□ 0.29
SNU13-201ENST00000215956 PEAK1Q9H792 1746 aa16.82■□□□□ 0.28
SNU13-201ENST00000215956 KCNQ2O43526 872 aa16.82■□□□□ 0.28
SNU13-201ENST00000215956 THRAP3Q9Y2W1 955 aaKnown RBP16.82■□□□□ 0.28
SNU13-201ENST00000215956 ACEP12821 1306 aa16.82■□□□□ 0.28
SNU13-201ENST00000215956 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
SNU13-201ENST00000215956 KIF7Q2M1P5 1343 aa16.81■□□□□ 0.28
SNU13-201ENST00000215956 KIAA1210Q9ULL0 1709 aa16.81■□□□□ 0.28
SNU13-201ENST00000215956 UTRNP46939 3433 aa16.81■□□□□ 0.28
SNU13-201ENST00000215956 USP19O94966 1318 aa16.81■□□□□ 0.28
SNU13-201ENST00000215956 COL5A2P05997 1499 aaPredicted RBP16.81■□□□□ 0.28
SNU13-201ENST00000215956 CENPBP07199 599 aaPredicted RBP16.81■□□□□ 0.28
SNU13-201ENST00000215956 CASZ1Q86V15 1759 aa16.81■□□□□ 0.28
SNU13-201ENST00000215956 ABTB2Q8N961 1025 aa16.81■□□□□ 0.28
SNU13-201ENST00000215956 CDK19Q9BWU1 502 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms