RNA–Protein interactions for RNA: ENST00000053867.7

GRN-201, Transcript of granulin precursor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRN, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-201ENST00000053867 U2AF1L5P0DN76 240 aaPredicted RBP20.19■□□□□ 0.82
GRN-201ENST00000053867 U2AF1Q01081 240 aaKnown RBP eCLIP20.19■□□□□ 0.82
GRN-201ENST00000053867 TCP11L2Q8N4U5 519 aa20.19■□□□□ 0.82
GRN-201ENST00000053867 RUNDC1Q96C34 613 aa20.19■□□□□ 0.82
GRN-201ENST00000053867 POLKQ9UBT6 870 aa20.19■□□□□ 0.82
GRN-201ENST00000053867 PTCH1Q13635 1447 aa20.19■□□□□ 0.82
GRN-201ENST00000053867 NEUROD2Q15784 382 aa20.19■□□□□ 0.82
GRN-201ENST00000053867 NKTRP30414 1462 aaKnown RBP20.18■□□□□ 0.82
GRN-201ENST00000053867 DIP2AQ14689 1571 aa20.18■□□□□ 0.82
GRN-201ENST00000053867 WWC1Q8IX03 1113 aa20.18■□□□□ 0.82
GRN-201ENST00000053867 IQSEC2Q5JU85 1478 aa20.17■□□□□ 0.82
GRN-201ENST00000053867 ACEP12821 1306 aa20.17■□□□□ 0.82
GRN-201ENST00000053867 XRN1Q8IZH2 1706 aaKnown RBP20.17■□□□□ 0.82
GRN-201ENST00000053867 PNPLA6Q8IY17 1366 aa20.17■□□□□ 0.82
GRN-201ENST00000053867 PLIN1O60240 522 aa20.17■□□□□ 0.82
GRN-201ENST00000053867 ANKLE2Q86XL3 938 aa20.17■□□□□ 0.82
GRN-201ENST00000053867 MON2Q7Z3U7 1717 aa20.17■□□□□ 0.82
GRN-201ENST00000053867 AKAP12Q02952 1782 aa20.16■□□□□ 0.82
GRN-201ENST00000053867 PLEKHG3A1L390 1219 aa20.16■□□□□ 0.82
GRN-201ENST00000053867 ZNF142P52746 1687 aaPredicted RBP20.15■□□□□ 0.82
GRN-201ENST00000053867 U2SURPO15042 1029 aaKnown RBP20.15■□□□□ 0.82
GRN-201ENST00000053867 TOPAZ1Q8N9V7 1692 aa20.15■□□□□ 0.82
GRN-201ENST00000053867 EMILIN1Q9Y6C2 1016 aa20.15■□□□□ 0.82
GRN-201ENST00000053867 PPM1GO15355 546 aaPredicted RBP20.14■□□□□ 0.82
GRN-201ENST00000053867 RBM33Q96EV2 1170 aaKnown RBP20.14■□□□□ 0.82
GRN-201ENST00000053867 PLEKHF1Q96S99 279 aa20.14■□□□□ 0.82
GRN-201ENST00000053867 ZNF692Q9BU19 519 aaPredicted RBP20.14■□□□□ 0.82
GRN-201ENST00000053867 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.82
GRN-201ENST00000053867 PMFBP1Q8TBY8 1022 aa20.14■□□□□ 0.81
GRN-201ENST00000053867 SETD1BQ9UPS6 1966 aaKnown RBP20.13■□□□□ 0.81
GRN-201ENST00000053867 TTC21BQ7Z4L5 1316 aa20.12■□□□□ 0.81
GRN-201ENST00000053867 ITSN1Q15811 1721 aa20.12■□□□□ 0.81
GRN-201ENST00000053867 TSHZ2Q9NRE2 1034 aa20.12■□□□□ 0.81
GRN-201ENST00000053867 DIAPH1O60610 1272 aaKnown RBP20.11■□□□□ 0.81
GRN-201ENST00000053867 MAP2P11137 1827 aaKnown RBP20.11■□□□□ 0.81
GRN-201ENST00000053867 RRS1Q15050 365 aaKnown RBP20.11■□□□□ 0.81
GRN-201ENST00000053867 EXOC6Q8TAG9 804 aa20.11■□□□□ 0.81
GRN-201ENST00000053867 PIK3R4Q99570 1358 aa20.11■□□□□ 0.81
GRN-201ENST00000053867 RGPD8O14715 1765 aaPredicted RBP20.1■□□□□ 0.81
GRN-201ENST00000053867 NGEFQ8N5V2 710 aa20.1■□□□□ 0.81
GRN-201ENST00000053867 COG3Q96JB2 828 aa20.1■□□□□ 0.81
GRN-201ENST00000053867 E9PSI1 815 aa20.09■□□□□ 0.81
GRN-201ENST00000053867 USP6P35125 1406 aa20.09■□□□□ 0.81
GRN-201ENST00000053867 NRKQ7Z2Y5 1582 aa20.09■□□□□ 0.81
GRN-201ENST00000053867 C20orf194Q5TEA3 1177 aa20.08■□□□□ 0.81
GRN-201ENST00000053867 SSH2Q76I76 1423 aa20.08■□□□□ 0.8
GRN-201ENST00000053867 AATKQ6ZMQ8 1374 aa20.07■□□□□ 0.8
GRN-201ENST00000053867 CHD2O14647 1828 aaKnown RBP20.06■□□□□ 0.8
GRN-201ENST00000053867 CCDC27Q2M243 656 aa20.05■□□□□ 0.8
GRN-201ENST00000053867 IL13P35225 146 aa20.04■□□□□ 0.8
GRN-201ENST00000053867 TMPOP42166 694 aaKnown RBP20.04■□□□□ 0.8
GRN-201ENST00000053867 OVOS2A0A0J9YW53 1432 aa20.04■□□□□ 0.8
GRN-201ENST00000053867 OVOS2Q6IE36 1432 aa20.04■□□□□ 0.8
GRN-201ENST00000053867 TRIM35Q9UPQ4 493 aa20.03■□□□□ 0.8
GRN-201ENST00000053867 NPHP4O75161 1426 aaPredicted RBP20.03■□□□□ 0.8
GRN-201ENST00000053867 BCAR3O75815 825 aa20.03■□□□□ 0.8
GRN-201ENST00000053867 RSPH6AQ9H0K4 717 aa20.03■□□□□ 0.8
GRN-201ENST00000053867 HMOX1P09601 288 aa20.02■□□□□ 0.8
GRN-201ENST00000053867 WDR63Q8IWG1 891 aa20.02■□□□□ 0.8
GRN-201ENST00000053867 NGDNQ8NEJ9 315 aaKnown RBP20.02■□□□□ 0.8
GRN-201ENST00000053867 CCDC136Q96JN2 1154 aa20.01■□□□□ 0.79
GRN-201ENST00000053867 CRBNQ96SW2 442 aa20.01■□□□□ 0.79
GRN-201ENST00000053867 CDK12Q9NYV4 1490 aaPredicted RBP20.01■□□□□ 0.79
GRN-201ENST00000053867 NALCNQ8IZF0 1738 aa20.01■□□□□ 0.79
GRN-201ENST00000053867 PRKAR2BP31323 418 aa20■□□□□ 0.79
GRN-201ENST00000053867 PHACTR3Q96KR7 559 aa20■□□□□ 0.79
GRN-201ENST00000053867 LRRC7Q96NW7 1537 aa20■□□□□ 0.79
GRN-201ENST00000053867 SOX12O15370 315 aa19.99■□□□□ 0.79
GRN-201ENST00000053867 FCHSD2O94868 740 aa19.99■□□□□ 0.79
GRN-201ENST00000053867 FMN2Q9NZ56 1722 aa19.99■□□□□ 0.79
GRN-201ENST00000053867 NCBP3Q53F19 620 aaKnown RBP19.99■□□□□ 0.79
GRN-201ENST00000053867 ANKARQ7Z5J8 1434 aa19.98■□□□□ 0.79
GRN-201ENST00000053867 MAPK8IP3Q9UPT6 1336 aa19.98■□□□□ 0.79
GRN-201ENST00000053867 USP31Q70CQ4 1352 aa19.97■□□□□ 0.79
GRN-201ENST00000053867 RIPK4P57078 832 aa19.97■□□□□ 0.79
GRN-201ENST00000053867 TTC21AQ8NDW8 1320 aa19.95■□□□□ 0.78
GRN-201ENST00000053867 TSR2Q969E8 191 aaKnown RBP19.95■□□□□ 0.78
GRN-201ENST00000053867 PEAK1Q9H792 1746 aa19.95■□□□□ 0.78
GRN-201ENST00000053867 HSP90AB2PQ58FF8 381 aa19.94■□□□□ 0.78
GRN-201ENST00000053867 EIF4A2Q14240 407 aaKnown RBP19.94■□□□□ 0.78
GRN-201ENST00000053867 NUTM2GQ5VZR2 741 aa19.94■□□□□ 0.78
GRN-201ENST00000053867 PIK3C2AO00443 1686 aa19.93■□□□□ 0.78
GRN-201ENST00000053867 ADGRL3Q9HAR2 1447 aa19.92■□□□□ 0.78
GRN-201ENST00000053867 MAP3K19Q56UN5 1328 aa19.92■□□□□ 0.78
GRN-201ENST00000053867 AEBP1Q8IUX7 1158 aa19.92■□□□□ 0.78
GRN-201ENST00000053867 RARSP54136 660 aaKnown RBP19.91■□□□□ 0.78
GRN-201ENST00000053867 PHF8Q9UPP1 1060 aa19.91■□□□□ 0.78
GRN-201ENST00000053867 PNNQ9H307 717 aaKnown RBP19.91■□□□□ 0.78
GRN-201ENST00000053867 FANCIQ9NVI1 1328 aa19.9■□□□□ 0.78
GRN-201ENST00000053867 NLRP6P59044 892 aa19.9■□□□□ 0.78
GRN-201ENST00000053867 THUMPD2Q9BTF0 503 aaKnown RBP19.9■□□□□ 0.78
GRN-201ENST00000053867 BCL2L13Q9BXK5 485 aa19.89■□□□□ 0.77
GRN-201ENST00000053867 HSPA2P54652 639 aa19.88■□□□□ 0.77
GRN-201ENST00000053867 NFE2L2Q16236 605 aa19.88■□□□□ 0.77
GRN-201ENST00000053867 MYH16Q9H6N6 1097 aa19.88■□□□□ 0.77
GRN-201ENST00000053867 ESCO1Q5FWF5 840 aa19.88■□□□□ 0.77
GRN-201ENST00000053867 PAK3O75914 559 aaPredicted RBP19.87■□□□□ 0.77
GRN-201ENST00000053867 ORAI2Q96SN7 254 aa19.87■□□□□ 0.77
GRN-201ENST00000053867 TNNQ9UQP3 1299 aa19.87■□□□□ 0.77
GRN-201ENST00000053867 MARF1Q9Y4F3 1742 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms