RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 CDK19Q9BWU1 502 aa23.04■■□□□ 1.28
ERCC1-201ENST00000013807 NBPF1Q3BBV0 1214 aa23.03■■□□□ 1.28
ERCC1-201ENST00000013807 CCDC61Q9Y6R9 512 aa23.03■■□□□ 1.28
ERCC1-201ENST00000013807 PLEKHG3A1L390 1219 aa23.02■■□□□ 1.28
ERCC1-201ENST00000013807 SEPT12Q8IYM1 358 aa23.02■■□□□ 1.28
ERCC1-201ENST00000013807 BLMP54132 1417 aaPredicted RBP22.99■■□□□ 1.27
ERCC1-201ENST00000013807 BTG4Q9NY30 223 aa22.99■■□□□ 1.27
ERCC1-201ENST00000013807 PHRF1Q9P1Y6 1649 aaKnown RBP22.99■■□□□ 1.27
ERCC1-201ENST00000013807 PAK3O75914 559 aaPredicted RBP22.97■■□□□ 1.27
ERCC1-201ENST00000013807 PLEKHG5O94827 1062 aa22.97■■□□□ 1.27
ERCC1-201ENST00000013807 NBPF8Q3BBV2 869 aa22.97■■□□□ 1.27
ERCC1-201ENST00000013807 SRCAPQ6ZRS2 3230 aa22.97■■□□□ 1.27
ERCC1-201ENST00000013807 ACEP12821 1306 aa22.97■■□□□ 1.27
ERCC1-201ENST00000013807 L3MBTL2Q969R5 705 aa22.95■■□□□ 1.26
ERCC1-201ENST00000013807 QRICH2Q9H0J4 1663 aa22.95■■□□□ 1.26
ERCC1-201ENST00000013807 CENPJQ9HC77 1338 aaPredicted RBP22.95■■□□□ 1.26
ERCC1-201ENST00000013807 KRT27Q7Z3Y8 459 aa22.94■■□□□ 1.26
ERCC1-201ENST00000013807 CCDC9Q9Y3X0 531 aaKnown RBP22.94■■□□□ 1.26
ERCC1-201ENST00000013807 TRPM1Q7Z4N2 1603 aa22.93■■□□□ 1.26
ERCC1-201ENST00000013807 SPATA31A5Q5VU36 1347 aa22.93■■□□□ 1.26
ERCC1-201ENST00000013807 SPATA31A7Q8IWB4 1347 aa22.93■■□□□ 1.26
ERCC1-201ENST00000013807 BRD4O60885 1362 aaPredicted RBP22.92■■□□□ 1.26
ERCC1-201ENST00000013807 PRDM11Q9NQV5 511 aa22.92■■□□□ 1.26
ERCC1-201ENST00000013807 THSD7AQ9UPZ6 1657 aa22.91■■□□□ 1.26
ERCC1-201ENST00000013807 ZRANB1Q9UGI0 708 aa22.91■■□□□ 1.26
ERCC1-201ENST00000013807 KIAA0232Q92628 1395 aa22.9■■□□□ 1.26
ERCC1-201ENST00000013807 FAM98CQ17RN3 349 aaKnown RBP22.89■■□□□ 1.25
ERCC1-201ENST00000013807 PPIP5K1Q6PFW1 1433 aa22.88■■□□□ 1.25
ERCC1-201ENST00000013807 CPDO75976 1380 aa22.88■■□□□ 1.25
ERCC1-201ENST00000013807 USP19O94966 1318 aa22.87■■□□□ 1.25
ERCC1-201ENST00000013807 SIN3AQ96ST3 1273 aa22.87■■□□□ 1.25
ERCC1-201ENST00000013807 NRKQ7Z2Y5 1582 aa22.87■■□□□ 1.25
ERCC1-201ENST00000013807 SRPK2P78362 688 aaKnown RBP22.86■■□□□ 1.25
ERCC1-201ENST00000013807 ABTB2Q8N961 1025 aa22.86■■□□□ 1.25
ERCC1-201ENST00000013807 LMO7Q8WWI1 1683 aa22.86■■□□□ 1.25
ERCC1-201ENST00000013807 SPATA31A1Q5TZJ5 1347 aa22.85■■□□□ 1.25
ERCC1-201ENST00000013807 SF3B2Q13435 895 aaKnown RBP22.84■■□□□ 1.25
ERCC1-201ENST00000013807 CABP2Q9NPB3 220 aa22.84■■□□□ 1.25
ERCC1-201ENST00000013807 RGPD1P0DJD0 1748 aa22.84■■□□□ 1.25
ERCC1-201ENST00000013807 ZC3H6P61129 1189 aaKnown RBP22.83■■□□□ 1.25
ERCC1-201ENST00000013807 CHRNA2Q15822 529 aa22.83■■□□□ 1.25
ERCC1-201ENST00000013807 DEFB132Q7Z7B7 95 aa22.83■■□□□ 1.25
ERCC1-201ENST00000013807 NLRP13Q86W25 1043 aa22.83■■□□□ 1.25
ERCC1-201ENST00000013807 CAMTA1Q9Y6Y1 1673 aa22.83■■□□□ 1.24
ERCC1-201ENST00000013807 NUTM2GQ5VZR2 741 aa22.82■■□□□ 1.24
ERCC1-201ENST00000013807 USP6P35125 1406 aa22.82■■□□□ 1.24
ERCC1-201ENST00000013807 SSH2Q76I76 1423 aa22.82■■□□□ 1.24
ERCC1-201ENST00000013807 CABP1Q9NZU7 370 aa22.81■■□□□ 1.24
ERCC1-201ENST00000013807 GCP02774 474 aa22.8■■□□□ 1.24
ERCC1-201ENST00000013807 EVC2Q86UK5 1308 aa22.8■■□□□ 1.24
ERCC1-201ENST00000013807 AKAP12Q02952 1782 aa22.79■■□□□ 1.24
ERCC1-201ENST00000013807 A0A0G2JS52 829 aa22.79■■□□□ 1.24
ERCC1-201ENST00000013807 MYT1Q01538 1121 aa22.79■■□□□ 1.24
ERCC1-201ENST00000013807 BARGINQ6ZT62 677 aa22.79■■□□□ 1.24
ERCC1-201ENST00000013807 TNS1Q9HBL0 1735 aaKnown RBP22.78■■□□□ 1.24
ERCC1-201ENST00000013807 ROCK2O75116 1388 aaKnown RBP22.77■■□□□ 1.24
ERCC1-201ENST00000013807 DISP2A7MBM2 1401 aa22.77■■□□□ 1.24
ERCC1-201ENST00000013807 SLIT3O75094 1523 aa22.77■■□□□ 1.24
ERCC1-201ENST00000013807 BAG6P46379 1132 aa22.76■■□□□ 1.23
ERCC1-201ENST00000013807 NEUROD1Q13562 356 aa22.76■■□□□ 1.23
ERCC1-201ENST00000013807 STRN4Q9NRL3 753 aa22.76■■□□□ 1.23
ERCC1-201ENST00000013807 PIK3C2AO00443 1686 aa22.75■■□□□ 1.23
ERCC1-201ENST00000013807 ZNF692Q9BU19 519 aaPredicted RBP22.75■■□□□ 1.23
ERCC1-201ENST00000013807 COL18A1P39060 1754 aa22.75■■□□□ 1.23
ERCC1-201ENST00000013807 SBNO2Q9Y2G9 1366 aa22.75■■□□□ 1.23
ERCC1-201ENST00000013807 EVA1CP58658 441 aa22.74■■□□□ 1.23
ERCC1-201ENST00000013807 THRAP3Q9Y2W1 955 aaKnown RBP22.74■■□□□ 1.23
ERCC1-201ENST00000013807 PARP4Q9UKK3 1724 aaKnown RBP22.73■■□□□ 1.23
ERCC1-201ENST00000013807 COL5A2P05997 1499 aaPredicted RBP22.73■■□□□ 1.23
ERCC1-201ENST00000013807 NLRP6P59044 892 aa22.72■■□□□ 1.23
ERCC1-201ENST00000013807 LARP1Q6PKG0 1096 aaKnown RBP22.72■■□□□ 1.23
ERCC1-201ENST00000013807 FAM196AQ6ZSG2 479 aa22.72■■□□□ 1.23
ERCC1-201ENST00000013807 AATKQ6ZMQ8 1374 aa22.72■■□□□ 1.23
ERCC1-201ENST00000013807 FAM182BQ5T319 152 aa22.71■■□□□ 1.23
ERCC1-201ENST00000013807 TCP11L2Q8N4U5 519 aa22.71■■□□□ 1.23
ERCC1-201ENST00000013807 CPSF1Q10570 1443 aaKnown RBP22.71■■□□□ 1.23
ERCC1-201ENST00000013807 MON2Q7Z3U7 1717 aa22.68■■□□□ 1.22
ERCC1-201ENST00000013807 LRP5O75197 1615 aa22.68■■□□□ 1.22
ERCC1-201ENST00000013807 CRB1P82279 1406 aa22.67■■□□□ 1.22
ERCC1-201ENST00000013807 TTC21BQ7Z4L5 1316 aa22.67■■□□□ 1.22
ERCC1-201ENST00000013807 TTC21AQ8NDW8 1320 aa22.67■■□□□ 1.22
ERCC1-201ENST00000013807 EN1Q05925 392 aaPredicted RBP22.67■■□□□ 1.22
ERCC1-201ENST00000013807 USP35Q9P2H5 1018 aa22.67■■□□□ 1.22
ERCC1-201ENST00000013807 RGPD5Q99666 1765 aa22.66■■□□□ 1.22
ERCC1-201ENST00000013807 USP54Q70EL1 1684 aa22.65■■□□□ 1.22
ERCC1-201ENST00000013807 PARD3Q8TEW0 1356 aa22.64■■□□□ 1.22
ERCC1-201ENST00000013807 PDE3BQ13370 1112 aa22.64■■□□□ 1.21
ERCC1-201ENST00000013807 KCNH5Q8NCM2 988 aa22.64■■□□□ 1.21
ERCC1-201ENST00000013807 CAMKK2Q96RR4 588 aa22.64■■□□□ 1.21
ERCC1-201ENST00000013807 C11orf95C9JLR9 678 aaPredicted RBP22.63■■□□□ 1.21
ERCC1-201ENST00000013807 ARHGEF25Q86VW2 580 aa22.63■■□□□ 1.21
ERCC1-201ENST00000013807 SBF2Q86WG5 1849 aa22.63■■□□□ 1.21
ERCC1-201ENST00000013807 WNK3Q9BYP7 1800 aa22.62■■□□□ 1.21
ERCC1-201ENST00000013807 TRIM37O94972 964 aa22.62■■□□□ 1.21
ERCC1-201ENST00000013807 PUS7Q96PZ0 661 aaKnown RBP22.62■■□□□ 1.21
ERCC1-201ENST00000013807 PEAK1Q9H792 1746 aa22.62■■□□□ 1.21
ERCC1-201ENST00000013807 CARD11Q9BXL7 1154 aa22.61■■□□□ 1.21
ERCC1-201ENST00000013807 AXIN2Q9Y2T1 843 aa22.61■■□□□ 1.21
ERCC1-201ENST00000013807 RREB1Q92766 1687 aa22.61■■□□□ 1.21
ERCC1-201ENST00000013807 ABCC6O95255 1503 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms