RNA–Protein interactions for RNA: ENST00000012443.8

PPP5C-201, Transcript of protein phosphatase 5 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP5C, Length 2,109 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP5C-201ENST00000012443 U2AF1Q01081 240 aaKnown RBP eCLIP28.25■■■□□ 2.11
PPP5C-201ENST00000012443 PLEKHG1Q9ULL1 1385 aa28.25■■■□□ 2.11
PPP5C-201ENST00000012443 FYB1O15117 783 aa28.25■■■□□ 2.11
PPP5C-201ENST00000012443 CPS1P31327 1500 aa28.24■■■□□ 2.11
PPP5C-201ENST00000012443 HDGFL2Q7Z4V5 671 aaPredicted RBP28.24■■■□□ 2.11
PPP5C-201ENST00000012443 KIF20BQ96Q89 1820 aa28.23■■■□□ 2.11
PPP5C-201ENST00000012443 WASLO00401 505 aaPredicted RBP28.23■■■□□ 2.11
PPP5C-201ENST00000012443 PDE3AQ14432 1141 aa28.22■■■□□ 2.11
PPP5C-201ENST00000012443 PAK3O75914 559 aaPredicted RBP28.21■■■□□ 2.11
PPP5C-201ENST00000012443 ARHGAP23Q9P227 1491 aa28.2■■■□□ 2.1
PPP5C-201ENST00000012443 SLIT1O75093 1534 aa28.2■■■□□ 2.1
PPP5C-201ENST00000012443 PLPPR3Q6T4P5 718 aa28.19■■■□□ 2.1
PPP5C-201ENST00000012443 ATP7BP35670 1465 aa28.19■■■□□ 2.1
PPP5C-201ENST00000012443 ROBO2Q9HCK4 1378 aa28.18■■■□□ 2.1
PPP5C-201ENST00000012443 RARSP54136 660 aaKnown RBP28.17■■■□□ 2.1
PPP5C-201ENST00000012443 EID1Q9Y6B2 187 aa28.16■■■□□ 2.1
PPP5C-201ENST00000012443 CANXP27824 592 aaKnown RBP28.15■■■□□ 2.1
PPP5C-201ENST00000012443 PLEKHF1Q96S99 279 aa28.15■■■□□ 2.1
PPP5C-201ENST00000012443 NPM2Q86SE8 214 aaKnown RBP28.15■■■□□ 2.1
PPP5C-201ENST00000012443 MYH16Q9H6N6 1097 aa28.14■■■□□ 2.1
PPP5C-201ENST00000012443 CPSF1Q10570 1443 aaKnown RBP28.14■■■□□ 2.09
PPP5C-201ENST00000012443 U2SURPO15042 1029 aaKnown RBP28.13■■■□□ 2.09
PPP5C-201ENST00000012443 ZBTB47Q9UFB7 747 aaPredicted RBP28.13■■■□□ 2.09
PPP5C-201ENST00000012443 PPIP5K1Q6PFW1 1433 aa28.13■■■□□ 2.09
PPP5C-201ENST00000012443 PNPLA6Q8IY17 1366 aa28.13■■■□□ 2.09
PPP5C-201ENST00000012443 NUDT16Q96DE0 195 aaKnown RBP28.12■■■□□ 2.09
PPP5C-201ENST00000012443 SLC26A8Q96RN1 970 aa28.12■■■□□ 2.09
PPP5C-201ENST00000012443 PANK1Q8TE04 598 aa28.12■■■□□ 2.09
PPP5C-201ENST00000012443 THEMISQ8N1K5 641 aaPredicted RBP28.11■■■□□ 2.09
PPP5C-201ENST00000012443 PTPRUQ92729 1446 aa28.11■■■□□ 2.09
PPP5C-201ENST00000012443 FRAT1Q92837 279 aaPredicted RBP28.1■■■□□ 2.09
PPP5C-201ENST00000012443 COG6Q9Y2V7 657 aa28.1■■■□□ 2.09
PPP5C-201ENST00000012443 CCDC61Q9Y6R9 512 aa28.09■■■□□ 2.09
PPP5C-201ENST00000012443 NCKAP5LQ9HCH0 1330 aa28.09■■■□□ 2.09
PPP5C-201ENST00000012443 CLUAP1Q96AJ1 413 aa28.09■■■□□ 2.09
PPP5C-201ENST00000012443 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.08■■■□□ 2.09
PPP5C-201ENST00000012443 TMPOP42166 694 aaKnown RBP28.08■■■□□ 2.09
PPP5C-201ENST00000012443 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.08■■■□□ 2.092e-6■■■□□ 14.9
PPP5C-201ENST00000012443 CDC42BPGQ6DT37 1551 aa28.07■■■□□ 2.08
PPP5C-201ENST00000012443 DIAPH1O60610 1272 aaKnown RBP28.07■■■□□ 2.08
PPP5C-201ENST00000012443 TBX22Q9Y458 520 aa28.07■■■□□ 2.08
PPP5C-201ENST00000012443 MAPK8IP3Q9UPT6 1336 aa28.07■■■□□ 2.08
PPP5C-201ENST00000012443 PRR36Q9H6K5 1346 aa28.06■■■□□ 2.08
PPP5C-201ENST00000012443 EDC4Q6P2E9 1401 aaKnown RBP28.06■■■□□ 2.08
PPP5C-201ENST00000012443 IGHDP01880 384 aa28.05■■■□□ 2.08
PPP5C-201ENST00000012443 TRIM35Q9UPQ4 493 aa28.04■■■□□ 2.08
PPP5C-201ENST00000012443 BCL2L13Q9BXK5 485 aa28.03■■■□□ 2.08
PPP5C-201ENST00000012443 AMOTL2Q9Y2J4 779 aa28.02■■■□□ 2.08
PPP5C-201ENST00000012443 CT47B1P0C2W7 299 aaPredicted RBP28.01■■■□□ 2.08
PPP5C-201ENST00000012443 FAM161AQ3B820 660 aa28.01■■■□□ 2.08
PPP5C-201ENST00000012443 RLBP1P12271 317 aa28.01■■■□□ 2.07
PPP5C-201ENST00000012443 AAMPQ13685 434 aa28.01■■■□□ 2.07
PPP5C-201ENST00000012443 RGS3P49796 1198 aa28■■■□□ 2.07
PPP5C-201ENST00000012443 C8orf34Q49A92 452 aa28■■■□□ 2.07
PPP5C-201ENST00000012443 TSR2Q969E8 191 aaKnown RBP28■■■□□ 2.07
PPP5C-201ENST00000012443 LRRC7Q96NW7 1537 aa28■■■□□ 2.07
PPP5C-201ENST00000012443 MON2Q7Z3U7 1717 aa28■■■□□ 2.07
PPP5C-201ENST00000012443 RIMS1Q86UR5 1692 aaKnown RBP28■■■□□ 2.07
PPP5C-201ENST00000012443 PNNQ9H307 717 aaKnown RBP28■■■□□ 2.07
PPP5C-201ENST00000012443 TNNQ9UQP3 1299 aa28■■■□□ 2.07
PPP5C-201ENST00000012443 CEP170BQ9Y4F5 1589 aaPredicted RBP27.99■■■□□ 2.07
PPP5C-201ENST00000012443 IL16Q14005 1332 aa27.99■■■□□ 2.07
PPP5C-201ENST00000012443 POLKQ9UBT6 870 aa27.99■■■□□ 2.07
PPP5C-201ENST00000012443 MAP2P11137 1827 aaKnown RBP27.98■■■□□ 2.07
PPP5C-201ENST00000012443 AKAP12Q02952 1782 aa27.98■■■□□ 2.07
PPP5C-201ENST00000012443 FBLN1P23142 703 aa27.98■■■□□ 2.07
PPP5C-201ENST00000012443 DIP2AQ14689 1571 aa27.97■■■□□ 2.07
PPP5C-201ENST00000012443 NME9Q86XW9 330 aa27.97■■■□□ 2.07
PPP5C-201ENST00000012443 RIPK4P57078 832 aa27.96■■■□□ 2.07
PPP5C-201ENST00000012443 PTCH1Q13635 1447 aa27.96■■■□□ 2.07
PPP5C-201ENST00000012443 FCHSD2O94868 740 aa27.95■■■□□ 2.07
PPP5C-201ENST00000012443 ZNF692Q9BU19 519 aaPredicted RBP27.95■■■□□ 2.07
PPP5C-201ENST00000012443 EXOSC9Q06265 439 aaKnown RBP27.94■■■□□ 2.06
PPP5C-201ENST00000012443 ZRANB1Q9UGI0 708 aa27.94■■■□□ 2.06
PPP5C-201ENST00000012443 ITSN1Q15811 1721 aa27.93■■■□□ 2.06
PPP5C-201ENST00000012443 TOPAZ1Q8N9V7 1692 aa27.93■■■□□ 2.06
PPP5C-201ENST00000012443 DNAJC5Q9H3Z4 198 aa27.93■■■□□ 2.06
PPP5C-201ENST00000012443 RSPH6AQ9H0K4 717 aa27.92■■■□□ 2.06
PPP5C-201ENST00000012443 ADAMTSL3P82987 1691 aa27.92■■■□□ 2.06
PPP5C-201ENST00000012443 PPM1GO15355 546 aaPredicted RBP27.92■■■□□ 2.06
PPP5C-201ENST00000012443 ZKSCAN2Q63HK3 967 aa27.92■■■□□ 2.06
PPP5C-201ENST00000012443 PLEKHG3A1L390 1219 aa27.91■■■□□ 2.06
PPP5C-201ENST00000012443 PMFBP1Q8TBY8 1022 aa27.91■■■□□ 2.06
PPP5C-201ENST00000012443 VIRMAQ69YN4 1812 aaKnown RBP27.91■■■□□ 2.06
PPP5C-201ENST00000012443 CDK12Q9NYV4 1490 aaPredicted RBP27.9■■■□□ 2.06
PPP5C-201ENST00000012443 DDRGK1Q96HY6 314 aa27.9■■■□□ 2.06
PPP5C-201ENST00000012443 PCDHB15Q9Y5E8 787 aa27.9■■■□□ 2.06
PPP5C-201ENST00000012443 XRN1Q8IZH2 1706 aaKnown RBP27.89■■■□□ 2.06
PPP5C-201ENST00000012443 NUTM2FA1L443 756 aa27.89■■■□□ 2.06
PPP5C-201ENST00000012443 AATKQ6ZMQ8 1374 aa27.89■■■□□ 2.06
PPP5C-201ENST00000012443 PRKAR2BP31323 418 aa27.89■■■□□ 2.05
PPP5C-201ENST00000012443 NBR1Q14596 966 aa27.89■■■□□ 2.05
PPP5C-201ENST00000012443 MVPQ14764 893 aaKnown RBP27.89■■■□□ 2.05
PPP5C-201ENST00000012443 SMC4Q9NTJ3 1288 aa27.88■■■□□ 2.05
PPP5C-201ENST00000012443 ACEP12821 1306 aa27.88■■■□□ 2.05
PPP5C-201ENST00000012443 EMILIN1Q9Y6C2 1016 aa27.88■■■□□ 2.05
PPP5C-201ENST00000012443 DZIP1LQ8IYY4 767 aaKnown RBP27.87■■■□□ 2.05
PPP5C-201ENST00000012443 COG3Q96JB2 828 aa27.87■■■□□ 2.05
PPP5C-201ENST00000012443 SSH1Q8WYL5 1049 aa27.86■■■□□ 2.05
PPP5C-201ENST00000012443 NRKQ7Z2Y5 1582 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms