RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 GsdmaQ9EST1 446 aa10.83□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Rprd2Q6NXI6 1469 aaKnown RBP10.83□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Kif3aP28741 701 aa10.83□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Zhx1P70121 873 aa10.83□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Lmo7E9PYF4 1699 aaKnown RBP10.83□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Cfap65Q3V0B4 1847 aa10.83□□□□□ -0.68
Col28a1-201ENSMUST00000115537 NcapgE9PWG6 1004 aa10.82□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Scaf1Q5U4C3 1256 aaKnown RBP10.82□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Rnf214Q8BFU3 668 aaKnown RBP10.82□□□□□ -0.68
Col28a1-201ENSMUST00000115537 PtmsQ9D0J8 101 aaKnown RBP10.82□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Dennd6aQ8BH65 605 aa10.82□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Farp2Q91VS8 1065 aa10.82□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Naip6Q9JIB6 1403 aa10.82□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Ralbp1Q62172 648 aa10.82□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Rapgef3Q8VCC8 918 aa10.82□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Fmnl2A2APV2 1086 aa10.81□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Ksr2Q3UVC0 959 aa10.81□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Ppm1fQ8CGA0 452 aa10.81□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Tbc1d32Q3URV1 1296 aa10.81□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Map7d2A2AG50 781 aa10.81□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Gimap6Q8K349 305 aa10.81□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Chmp7Q8R1T1 451 aa10.81□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Zfyve16Q80U44 1528 aa10.81□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Pprc1Q6NZN1 1644 aa10.8□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Zpr1Q62384 459 aa10.8□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Gm973E9Q295 1059 aa10.8□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Znf330Q922H9 316 aa10.8□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Tmem132aQ922P8 1018 aa10.8□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Hfm1D3Z4R1 1434 aa10.8□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Gys2Q8VCB3 704 aa10.8□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Plcd3Q8K2J0 785 aa10.79□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Ppp2r1aQ76MZ3 589 aa10.79□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Nectin2P32507 530 aa10.79□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Antxr1Q9CZ52 562 aa10.79□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Ripk4Q9ERK0 786 aa10.79□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Kdm3bQ6ZPY7 1562 aa10.79□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Fndc1E9Q043 1732 aa10.78□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Gripap1Q8VD04 806 aa10.78□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Prrc2bQ7TPM1 1486 aaKnown RBP10.78□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Adgrl2Q8JZZ7 1487 aa10.78□□□□□ -0.68
Col28a1-201ENSMUST00000115537 MpripP97434 1024 aa10.78□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Ccdc94Q9D6J3 314 aa10.78□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Slain2Q8CI08 581 aa10.77□□□□□ -0.68
Col28a1-201ENSMUST00000115537 Pcmtd1P59913 357 aa10.77□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Zmym4A2A791 1549 aaKnown RBP10.77□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Kiaa0753Q6A000 959 aa10.76□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Atp10aO54827 1508 aa10.76□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Dixdc1Q80Y83 711 aa10.76□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Kiaa1551Q5DTW7 1521 aa10.76□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Mroh2aD3Z750 1679 aa10.76□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Ak9G3UYQ4 1894 aa10.76□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Cers3Q1A3B0 383 aa10.76□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Kif4P33174 1231 aa10.75□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Gzf1Q4VBD9 706 aa10.75□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Ccar1Q8CH18 1146 aaKnown RBP10.75□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Peg3Q3URU2 1571 aa10.75□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Zmym3Q9JLM4 1370 aa10.75□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Cog6Q8R3I3 657 aa10.74□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Glipr1l2Q9CQ35 332 aa10.74□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.74□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Wdr78E9PYY5 807 aa10.74□□□□□ -0.69
Col28a1-201ENSMUST00000115537 RdxP26043 583 aaKnown RBP10.74□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Kif18aQ91WD7 886 aa10.74□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Polr3aB2RXC6 1390 aa10.74□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Gm21680A0A0G2JGR8 267 aa10.74□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Ccdc146E9Q9F7 977 aa10.74□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Mrvi1Q9WUX5 899 aaKnown RBP10.73□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Ccdc173A0JLY1 547 aa10.73□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Apaf1O88879 1249 aa10.73□□□□□ -0.69
Col28a1-201ENSMUST00000115537 ZgpatQ8VDM1 511 aa10.73□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Fam50bQ9WTJ8 334 aa10.73□□□□□ -0.69
Col28a1-201ENSMUST00000115537 PrxO55103 1391 aa10.73□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Rab3gap2Q8BMG7 1366 aa10.73□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Talpid3E9PV87 1520 aa10.73□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Stk11ipQ3TAA7 1072 aa10.73□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Cc2d1aQ8K1A6 943 aa10.73□□□□□ -0.69
Col28a1-201ENSMUST00000115537 TkfcQ8VC30 578 aa10.73□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Rcan3Q9JKK0 239 aa10.73□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Duxf3A0A0N4SV92 674 aa10.72□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Speer4bQ9D9F7 267 aa10.72□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Tfip11Q9ERA6 838 aaKnown RBP10.72□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Pik3c2gO70167 1506 aa10.72□□□□□ -0.69
Col28a1-201ENSMUST00000115537 AatkQ80YE4 1365 aa10.72□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Bag4Q8CI61 457 aa10.72□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Bcl2l13P59017 434 aa10.72□□□□□ -0.69
Col28a1-201ENSMUST00000115537 4931400O07RikQ9D4M5 137 aa10.72□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Phlpp2Q8BXA7 1320 aa10.72□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Fam208aQ69ZR9 1610 aaKnown RBP10.71□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Syce3B5KM66 88 aa10.71□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Zkscan1Q8BGS3 561 aaKnown RBP10.71□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Pank2Q3U4S0 443 aa10.71□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Taf3Q5HZG4 932 aa10.71□□□□□ -0.69
Col28a1-201ENSMUST00000115537 Gsdma3Q5Y4Y6 464 aa10.71□□□□□ -0.69
Col28a1-201ENSMUST00000115537 SkilQ60665 675 aa10.71□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Tmx3Q8BXZ1 456 aa10.71□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Chmp4bQ9D8B3 224 aaKnown RBP10.71□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Erbb4Q61527 1308 aa10.71□□□□□ -0.7
Col28a1-201ENSMUST00000115537 ImpactO55091 318 aa10.7□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Ddx17Q501J6 650 aaKnown RBP10.7□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Fam114a1Q9D281 569 aa10.7□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms