RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Secisbp2lQ6A098 1086 aaKnown RBP21.6■■□□□ 1.05
Trim71-201ENSMUST00000111816 Gbp1Q01514 589 aa21.6■■□□□ 1.05
Trim71-201ENSMUST00000111816 Tango6Q8C3S2 1079 aa21.6■■□□□ 1.05
Trim71-201ENSMUST00000111816 TnmdQ9EP64 317 aa21.6■■□□□ 1.05
Trim71-201ENSMUST00000111816 FosbP13346 338 aa21.6■■□□□ 1.05
Trim71-201ENSMUST00000111816 Kif15Q6P9L6 1387 aa21.6■■□□□ 1.05
Trim71-201ENSMUST00000111816 Tax1bp1Q3UKC1 814 aaKnown RBP21.6■■□□□ 1.05
Trim71-201ENSMUST00000111816 Lrrfip1Q3UZ39 729 aaKnown RBP21.6■■□□□ 1.05
Trim71-201ENSMUST00000111816 Pak3Q61036 559 aa21.6■■□□□ 1.05
Trim71-201ENSMUST00000111816 Lamb3Q61087 1168 aa21.6■■□□□ 1.05
Trim71-201ENSMUST00000111816 Rsph4aQ8BYM7 716 aa21.6■■□□□ 1.05
Trim71-201ENSMUST00000111816 Pafah1b1P63005 410 aaKnown RBP21.59■■□□□ 1.05
Trim71-201ENSMUST00000111816 Rbm28Q8CGC6 750 aaKnown RBP21.59■■□□□ 1.05
Trim71-201ENSMUST00000111816 Kif27Q7M6Z4 1394 aa21.59■■□□□ 1.05
Trim71-201ENSMUST00000111816 Zhx1P70121 873 aa21.59■■□□□ 1.05
Trim71-201ENSMUST00000111816 Sox12Q04890 314 aa21.59■■□□□ 1.05
Trim71-201ENSMUST00000111816 Neurod6P48986 337 aa21.59■■□□□ 1.05
Trim71-201ENSMUST00000111816 Q8C5K5 320 aa21.59■■□□□ 1.05
Trim71-201ENSMUST00000111816 Cavin1O54724 392 aa21.59■■□□□ 1.05
Trim71-201ENSMUST00000111816 Gbp2Q9Z0E6 589 aa21.59■■□□□ 1.05
Trim71-201ENSMUST00000111816 Ppm1fQ8CGA0 452 aa21.58■■□□□ 1.05
Trim71-201ENSMUST00000111816 Calcoco1Q8CGU1 691 aa21.58■■□□□ 1.05
Trim71-201ENSMUST00000111816 Jakmip3Q5DTN8 844 aa21.58■■□□□ 1.05
Trim71-201ENSMUST00000111816 DesP31001 469 aaKnown RBP21.58■■□□□ 1.04
Trim71-201ENSMUST00000111816 Plekhh2Q8C115 1491 aa21.58■■□□□ 1.04
Trim71-201ENSMUST00000111816 Adck5Q80V03 582 aa21.57■■□□□ 1.04
Trim71-201ENSMUST00000111816 Lrrfip2Q91WK0 415 aa21.57■■□□□ 1.04
Trim71-201ENSMUST00000111816 Rsrc1Q9DBU6 334 aa21.57■■□□□ 1.04
Trim71-201ENSMUST00000111816 Q9D2X8 372 aa21.57■■□□□ 1.04
Trim71-201ENSMUST00000111816 Diaph1O08808 1255 aa21.56■■□□□ 1.04
Trim71-201ENSMUST00000111816 Zfp853A0A1D5RM95 733 aa21.56■■□□□ 1.04
Trim71-201ENSMUST00000111816 Zrsr1Q64707 428 aa21.56■■□□□ 1.04
Trim71-201ENSMUST00000111816 Odf2lQ9D478 642 aa21.56■■□□□ 1.04
Trim71-201ENSMUST00000111816 Baz1bQ9Z277 1479 aa21.56■■□□□ 1.04
Trim71-201ENSMUST00000111816 Zkscan1Q8BGS3 561 aaKnown RBP21.56■■□□□ 1.04
Trim71-201ENSMUST00000111816 Fbxo3Q9DC63 480 aa21.56■■□□□ 1.04
Trim71-201ENSMUST00000111816 Stk11ipQ3TAA7 1072 aa21.56■■□□□ 1.04
Trim71-201ENSMUST00000111816 Maats1Q8BRC6 783 aa21.56■■□□□ 1.04
Trim71-201ENSMUST00000111816 Stk38Q91VJ4 465 aa21.55■■□□□ 1.04
Trim71-201ENSMUST00000111816 Rfc1P35601 1131 aa21.55■■□□□ 1.04
Trim71-201ENSMUST00000111816 Mcm2P97310 904 aa21.55■■□□□ 1.04
Trim71-201ENSMUST00000111816 Senp3Q9EP97 568 aaKnown RBP21.55■■□□□ 1.04
Trim71-201ENSMUST00000111816 Mical3Q8CJ19 1993 aa21.55■■□□□ 1.04
Trim71-201ENSMUST00000111816 Cfap45Q9D9U9 551 aa21.55■■□□□ 1.04
Trim71-201ENSMUST00000111816 Cep131Q62036 1060 aa21.55■■□□□ 1.04
Trim71-201ENSMUST00000111816 Chmp7Q8R1T1 451 aa21.55■■□□□ 1.04
Trim71-201ENSMUST00000111816 Txndc2Q6P902 515 aa21.54■■□□□ 1.04
Trim71-201ENSMUST00000111816 Ncapg2Q6DFV1 1138 aa21.54■■□□□ 1.04
Trim71-201ENSMUST00000111816 Skor2A7M7C7 1008 aa21.54■■□□□ 1.04
Trim71-201ENSMUST00000111816 Hoxa7P02830 229 aa21.54■■□□□ 1.04
Trim71-201ENSMUST00000111816 Gse1Q3U3C9 1213 aa21.53■■□□□ 1.04
Trim71-201ENSMUST00000111816 SarnpQ9D1J3 210 aaKnown RBP21.53■■□□□ 1.04
Trim71-201ENSMUST00000111816 Trerf1Q8BXJ2 1205 aa21.53■■□□□ 1.04
Trim71-201ENSMUST00000111816 Gm7361D3Z6R1 267 aa21.53■■□□□ 1.04
Trim71-201ENSMUST00000111816 Slu7Q8BHJ9 585 aa21.53■■□□□ 1.04
Trim71-201ENSMUST00000111816 Olfml1Q8BSH2 233 aa21.53■■□□□ 1.04
Trim71-201ENSMUST00000111816 Fbf1A2A870 1173 aa21.53■■□□□ 1.04
Trim71-201ENSMUST00000111816 Specc1lQ2KN98 1118 aaKnown RBP21.53■■□□□ 1.04
Trim71-201ENSMUST00000111816 Ktn1Q61595 1327 aaKnown RBP21.52■■□□□ 1.04
Trim71-201ENSMUST00000111816 Ccdc183A2AJB1 534 aa21.52■■□□□ 1.04
Trim71-201ENSMUST00000111816 Tacc1Q6Y685 774 aa21.52■■□□□ 1.04
Trim71-201ENSMUST00000111816 Gtpbp4Q99ME9 634 aaKnown RBP21.52■■□□□ 1.04
Trim71-201ENSMUST00000111816 Paxbp1P58501 919 aa21.52■■□□□ 1.04
Trim71-201ENSMUST00000111816 Map7d1A2AJI0 846 aa21.52■■□□□ 1.04
Trim71-201ENSMUST00000111816 Gnl3lQ6PGG6 577 aaKnown RBP21.52■■□□□ 1.04
Trim71-201ENSMUST00000111816 Cyp26c1B2RXA7 518 aa21.52■■□□□ 1.03
Trim71-201ENSMUST00000111816 Frmd3Q8BHD4 595 aa21.52■■□□□ 1.03
Trim71-201ENSMUST00000111816 Brd2Q7JJ13 798 aaKnown RBP21.51■■□□□ 1.03
Trim71-201ENSMUST00000111816 Sdccag8Q80UF4 717 aa21.51■■□□□ 1.03
Trim71-201ENSMUST00000111816 Gm45140A0A0N4SUM8 220 aa21.51■■□□□ 1.03
Trim71-201ENSMUST00000111816 Trim25Q61510 634 aaKnown RBP21.5■■□□□ 1.03
Trim71-201ENSMUST00000111816 Hmox1P14901 289 aa21.5■■□□□ 1.03
Trim71-201ENSMUST00000111816 Rab3il1Q8VDV3 383 aa21.5■■□□□ 1.03
Trim71-201ENSMUST00000111816 Kif2aP28740 705 aa21.5■■□□□ 1.03
Trim71-201ENSMUST00000111816 Themis2Q91YX0 663 aa21.5■■□□□ 1.03
Trim71-201ENSMUST00000111816 Prkrip1Q9CWV6 186 aaKnown RBP21.5■■□□□ 1.03
Trim71-201ENSMUST00000111816 Mcm3P25206 812 aaKnown RBP21.5■■□□□ 1.03
Trim71-201ENSMUST00000111816 Erich4Q3UNU4 136 aa21.5■■□□□ 1.03
Trim71-201ENSMUST00000111816 ScaperF8VQ70 1398 aaKnown RBP21.5■■□□□ 1.03
Trim71-201ENSMUST00000111816 Ehbp1Q69ZW3 1231 aa21.49■■□□□ 1.03
Trim71-201ENSMUST00000111816 Sel1lQ9Z2G6 790 aa21.49■■□□□ 1.03
Trim71-201ENSMUST00000111816 Gm10471E9Q1C7 252 aa21.49■■□□□ 1.03
Trim71-201ENSMUST00000111816 Prl7d1P04769 244 aa21.49■■□□□ 1.03
Trim71-201ENSMUST00000111816 Luzp1Q8R4U7 1068 aaKnown RBP21.49■■□□□ 1.03
Trim71-201ENSMUST00000111816 Cdkl5Q3UTQ8 938 aa21.49■■□□□ 1.03
Trim71-201ENSMUST00000111816 Gnl2Q99LH1 728 aaKnown RBP21.49■■□□□ 1.03
Trim71-201ENSMUST00000111816 Cc2d1aQ8K1A6 943 aa21.49■■□□□ 1.03
Trim71-201ENSMUST00000111816 Gbp9Q8BTS3 619 aa21.48■■□□□ 1.03
Trim71-201ENSMUST00000111816 Lmbr1Q9JIT0 490 aa21.47■■□□□ 1.03
Trim71-201ENSMUST00000111816 Trak1Q6PD31 939 aa21.47■■□□□ 1.03
Trim71-201ENSMUST00000111816 Ppp1r9bQ6R891 817 aaKnown RBP21.47■■□□□ 1.03
Trim71-201ENSMUST00000111816 Aimp1P31230 310 aaKnown RBP21.47■■□□□ 1.03
Trim71-201ENSMUST00000111816 Eif5P59325 429 aaKnown RBP21.47■■□□□ 1.03
Trim71-201ENSMUST00000111816 Kiaa1211Q5PR69 1207 aa21.47■■□□□ 1.03
Trim71-201ENSMUST00000111816 Prpf4bQ61136 1007 aaKnown RBP21.47■■□□□ 1.03
Trim71-201ENSMUST00000111816 Ehmt1Q5DW34 1296 aa21.47■■□□□ 1.03
Trim71-201ENSMUST00000111816 Ccdc73Q8CDM4 1066 aa21.47■■□□□ 1.03
Trim71-201ENSMUST00000111816 Znf710Q3U288 666 aa21.47■■□□□ 1.03
Trim71-201ENSMUST00000111816 Ccdc42Q5SV66 316 aa21.47■■□□□ 1.03
Trim71-201ENSMUST00000111816 Gbp8Q2V6D6 525 aa21.46■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 68.1 ms