RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Zscan10Q3URR7 782 aa16.48■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Stk38Q91VJ4 465 aa16.48■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Nek4Q9Z1J2 792 aa16.48■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Tango6Q8C3S2 1079 aa16.48■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Usp16Q99LG0 825 aa16.48■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Cyp46a1Q9WVK8 500 aa16.48■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Ddx23D3Z0M9 819 aaKnown RBP16.47■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Ccdc191J3QQ27 883 aa16.47■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Paxip1Q6NZQ4 1056 aa16.47■□□□□ 0.23
Col5a1-201ENSMUST00000028280 SkilQ60665 675 aa16.47■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Nf2P46662 596 aa16.47■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Ccdc30Q8BVF4 654 aa16.47■□□□□ 0.23
Col5a1-201ENSMUST00000028280 CenpqQ9CPQ5 267 aa16.47■□□□□ 0.23
Col5a1-201ENSMUST00000028280 1700010I14RikQ7TPG0 532 aa16.47■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Dhx29Q6PGC1 1365 aaKnown RBP16.47■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Zkscan1Q8BGS3 561 aaKnown RBP16.46■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Ssr1Q9CY50 286 aaKnown RBP16.46■□□□□ 0.23
Col5a1-201ENSMUST00000028280 4921504E06RikQ8CET2 560 aa16.46■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Pmfbp1Q9WVQ0 1022 aa16.46■□□□□ 0.23
Col5a1-201ENSMUST00000028280 Ddx46Q569Z5 1032 aaKnown RBP16.46■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Sept6Q9R1T4 434 aa16.45■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Sv2bQ8BG39 683 aa16.45■□□□□ 0.22
Col5a1-201ENSMUST00000028280 ErbinQ80TH2 1402 aa16.45■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Esx1O88933 382 aa16.45■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Swt1Q9DBQ9 907 aa16.45■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Odf2lQ9D478 642 aa16.44■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Nol7Q9D7Z3 254 aaKnown RBP16.44■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Sart1Q9Z315 806 aaKnown RBP16.44■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Ppp2r3aB2RXC8 1150 aa16.44■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Exoc8Q6PGF7 716 aa16.44■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Gsto1O09131 240 aa16.44■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Tspyl3Q3UYP3 334 aa16.44■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Prpf4bQ61136 1007 aaKnown RBP16.44■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Trim25Q61510 634 aaKnown RBP16.44■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Tmc1Q8R4P5 757 aa16.44■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Stk3Q9JI10 497 aa16.44■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Babam1Q3UI43 333 aa16.43■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Gnl3lQ6PGG6 577 aaKnown RBP16.43■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Ercc6lQ8BHK9 1240 aa16.43■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Tnpo1Q8BFY9 898 aaKnown RBP16.43■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Skor1Q8BX46 964 aa16.43■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Gnl2Q99LH1 728 aaKnown RBP16.43■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Cux2P70298 1426 aa16.43■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Tubb6Q922F4 447 aa16.43■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Abl1P00520 1123 aa16.42■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Cbx1P83917 185 aaKnown RBP16.42■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Anapc15-psA0A140T8L6 141 aa16.42■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Ppfibp2O35711 882 aa16.42■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Pafah1b1P63005 410 aaKnown RBP16.42■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Pde1cQ64338 706 aa16.42■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Med4Q9CQA5 270 aa16.42■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Pdia4P08003 638 aaKnown RBP16.42■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Cnnm3Q32NY4 713 aa16.42■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Gm18336A0A140LIU8 765 aa16.42■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Gm21190A0A0G2JGJ6 266 aa16.42■□□□□ 0.22
Col5a1-201ENSMUST00000028280 PnisrA2AJT4 805 aaKnown RBP16.41■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Acbd3Q8BMP6 525 aa16.41■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Dnaaf4Q8R368 420 aa16.41■□□□□ 0.22
Col5a1-201ENSMUST00000028280 4921530L21RikQ9CQ47 274 aa16.41■□□□□ 0.22
Col5a1-201ENSMUST00000028280 NcapgE9PWG6 1004 aa16.41■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Zkscan2G3X952 960 aa16.41■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Slu7Q8BHJ9 585 aa16.41■□□□□ 0.22
Col5a1-201ENSMUST00000028280 MlecQ6ZQI3 291 aaKnown RBP16.4■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Erlin1Q91X78 346 aa16.4■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Sel1lQ9Z2G6 790 aa16.4■□□□□ 0.22
Col5a1-201ENSMUST00000028280 FanciQ8K368 1330 aa16.4■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Hoxa7P02830 229 aa16.4■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Eif5P59325 429 aaKnown RBP16.4■□□□□ 0.22
Col5a1-201ENSMUST00000028280 Agtpbp1Q641K1 1218 aa16.39■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Shq1Q7TMX5 569 aa16.39■□□□□ 0.21
Col5a1-201ENSMUST00000028280 BcanQ61361 883 aa16.39■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Lrrfip2Q91WK0 415 aa16.39■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Ripply1Q2WG77 201 aa16.39■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Ttll13A4Q9F6 804 aa16.39■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Adck5Q80V03 582 aa16.39■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Krt85Q9Z2T6 507 aa16.39■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Mink1Q9JM52 1308 aa16.38■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Mctp1E9PV86 951 aa16.38■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Pank1Q8K4K6 548 aa16.38■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Q9D9S1 216 aa16.38■□□□□ 0.21
Col5a1-201ENSMUST00000028280 CftrP26361 1476 aa16.38■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Fam184aE9PW83 1143 aa16.37■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Sept11Q8C1B7 431 aaKnown RBP16.37■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Smc1bQ920F6 1248 aa16.37■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Gm10471E9Q1C7 252 aa16.37■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Nsd2Q8BVE8 1365 aa16.37■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Sycp2Q9CUU3 1500 aa16.37■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Cfdp1O88271 295 aaKnown RBP16.37■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Cfap45Q9D9U9 551 aa16.37■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Smc1aQ9CU62 1233 aaKnown RBP16.37■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Cc2d2bA0A286YDU8 1405 aa16.37■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Gm7361D3Z6R1 267 aa16.36■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Fbf1A2A870 1173 aa16.36■□□□□ 0.21
Col5a1-201ENSMUST00000028280 IqcgQ80W32 419 aa16.36■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Eva1cP58659 440 aa16.36■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Ncapg2Q6DFV1 1138 aa16.36■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Fyb1O35601 819 aa16.36■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Gcc1Q9D4H2 778 aa16.36■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Kif20aP97329 887 aa16.36■□□□□ 0.21
Col5a1-201ENSMUST00000028280 Stk11ipQ3TAA7 1072 aa16.36■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 66.4 ms