RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	APEX2	Q9UBZ4	518 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	SFMBT1	Q9UHJ3	866 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	COQ4	Q9Y3A0	265 aa		10.42	□□□□□ -0.74
PHGDH-222	ENST00000641587	MYLK	Q15746	1914 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	FAM47DP	A6NHR8	397 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	EPHB6	O15197	1021 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	MSI1	O43347	362 aa	Known RBP	10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	C1QL1	O75973	258 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	GYPC	P04921	128 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	UCHL3	P15374	230 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	CASP14	P31944	242 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	CTSK	P43235	329 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	DNAJC3	Q13217	504 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	TEAD4	Q15561	434 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	TRIP4	Q15650	581 aa	Predicted RBP	10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	ARHGAP44	Q17R89	818 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	TSR1	Q2NL82	804 aa	Known RBP	10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	RAB41	Q5JT25	222 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	KLHDC7A	Q5VTJ3	777 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	ADAT2	Q7Z6V5	191 aa	Known RBP	10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	ADIPOR2	Q86V24	386 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	CNGA4	Q8IV77	575 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	FMNL3	Q8IVF7	1028 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	ARHGEF19	Q8IW93	802 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	SLC4A11	Q8NBS3	891 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	IGSF8	Q969P0	613 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	HEXIM2	Q96MH2	286 aa	Known RBP	10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	SLC6A18	Q96N87	628 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	PPP1R9B	Q96SB3	815 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	CDK5RAP1	Q96SZ6	601 aa	Known RBP	10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	SLC2A11	Q9BYW1	496 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	BTBD1	Q9H0C5	482 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	PCED1A	Q9H1Q7	454 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	SIX2	Q9NPC8	291 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	UBE2T	Q9NPD8	197 aa	Predicted RBP	10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	PRSS16	Q9NQE7	514 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	SERGEF	Q9UGK8	458 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	DNAJC12	Q9UKB3	198 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	STRIP2	Q9ULQ0	834 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	LUC7L2	Q9Y383	392 aa	Known RBP	10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	FHOD1	Q9Y613	1164 aa		10.41	□□□□□ -0.74
PHGDH-222	ENST00000641587	SETX	Q7Z333	2677 aa	Known RBP	10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587		A0A1W2PQJ5	194 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	TLX3	O43711	291 aa	Predicted RBP	10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	PCDHGA12	O60330	932 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	MFAP3L	O75121	409 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	DNTT	P04053	509 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	WNT1	P04628	370 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	IGHV4-34	P06331	123 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	CD27	P26842	260 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	CD70	P32970	193 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	KRT9	P35527	623 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	USP8	P40818	1118 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	ABCG1	P45844	678 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	TKTL1	P51854	596 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	RAD23B	P54727	409 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	ADK	P55263	362 aa	Known RBP	10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	TBX2	Q13207	712 aa	Predicted RBP	10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	SUZ12	Q15022	739 aa	Known RBP	10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	MPPE1	Q53F39	396 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	FIGN	Q5HY92	759 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	MBLAC2	Q68D91	279 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	RRAGA	Q7L523	313 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	SCUBE3	Q8IX30	993 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	PDCD7	Q8N8D1	485 aa	Known RBP	10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	LMO3	Q8TAP4	145 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	EDEM1	Q92611	657 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	TATDN2	Q93075	761 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	PLD4	Q96BZ4	506 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	EBF2	Q9HAK2	575 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	FTSJ1	Q9UET6	329 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	GGA2	Q9UJY4	613 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	CAPN11	Q9UMQ6	739 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	DAAM1	Q9Y4D1	1078 aa		10.4	□□□□□ -0.74
PHGDH-222	ENST00000641587	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.4	□□□□□ -0.75
PHGDH-222	ENST00000641587	COL5A1	P20908	1838 aa	Predicted RBP	10.4	□□□□□ -0.75
PHGDH-222	ENST00000641587	KALRN	O60229	2985 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	PTPRQ	Q9UMZ3	2332 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587		A0A1B0GTQ1	180 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	GOLGA6L7	A0A1B0GV03	622 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	LRRC53	A6NM62	1247 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	YJEFN3	A6XGL0	299 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587		E7ENQ6	273 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	WNT9A	O14904	365 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	TIMM44	O43615	452 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	NRDC	O43847	1150 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	ZBED1	O96006	694 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	PABPC1	P11940	636 aa	Known RBP	10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	KRT5	P13647	590 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	TBXAS1	P24557	533 aa	Predicted RBP	10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	ZBED6	P86452	979 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	SEMG2	Q02383	582 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	PDE4C	Q08493	712 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	ADIG	Q0VDE8	80 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	CUL2	Q13617	745 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	SHB	Q15464	509 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	GOLGA7B	Q2TAP0	167 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	KIAA0895L	Q68EN5	471 aa		10.39	□□□□□ -0.75
PHGDH-222	ENST00000641587	RFWD3	Q6PCD5	774 aa		10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms