RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 VASH2Q86V25 355 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 ZC3H3Q8IXZ2 948 aaKnown RBP11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 ZNF276Q8N554 614 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 FAM184AQ8NB25 1140 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 SYAP1Q96A49 352 aaPredicted RBP11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 AK8Q96MA6 479 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 FUCA2Q9BTY2 467 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 STRA6Q9BX79 667 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 CALN1Q9BXU9 219 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 KDM4CQ9H3R0 1056 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 MARCH2Q9P0N8 246 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 CYTH4Q9UIA0 394 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 TUBD1Q9UJT1 453 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 ACSL6Q9UKU0 697 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 U3KQA8 63 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 MYH11P35749 1972 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 PLXNA2O75051 1894 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 TARSL2A2RTX5 802 aaKnown RBP11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 VPS37CA5D8V6 355 aaPredicted RBP11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 C10orf142B7Z368 130 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 RNGTTO60942 597 aaKnown RBP11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 PHACTR2O75167 634 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 NEBLO76041 1014 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 TNFRSF8P28908 595 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 ADORA2BP29275 332 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 ATICP31939 592 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 POLE2P56282 527 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 MYL6P60660 151 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 HNRNPKP61978 463 aaKnown RBP eCLIP11.43□□□□□ -0.582e-6■■□□□ 14.2
PTP4A1-207ENST00000639568 IRX6P78412 446 aaPredicted RBP11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 C9orf64Q5T6V5 341 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 FHL5Q5TD97 284 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 RAB11FIP2Q7L804 512 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 KIAA0907Q7Z7F0 614 aaPredicted RBP11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 SCD5Q86SK9 330 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 CBWD2Q8IUF1 395 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 FAM217AQ8IXS0 508 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 LARP4BQ92615 738 aaKnown RBP11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 PLD4Q96BZ4 506 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 STRADBQ9C0K7 418 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 SMYD3Q9H7B4 428 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 EPB41L5Q9HCM4 733 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 BLOC1S4Q9NUP1 217 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 FAM49BQ9NUQ9 324 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 DNAJC28Q9NX36 388 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 CA5BQ9Y2D0 317 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 CELSR2Q9HCU4 2923 aa11.43□□□□□ -0.58
PTP4A1-207ENST00000639568 ARID1BQ8NFD5 2236 aaPredicted RBP11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 EDDM13A0A1B0GTR0 161 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 EME2A4GXA9 379 aaPredicted RBP11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 TMX2-CTNND1H3BSU7 103 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 KIF20AO95235 890 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 STAU1O95793 577 aaKnown RBP11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 ASLP04424 464 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 JMJD7P0C870 316 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 GAP43P17677 238 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 CD70P32970 193 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 UGT1A5P35504 534 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 RPIAP49247 311 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 ALCAMQ13740 583 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 NR0B2Q15466 257 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 ARL6IP4Q66PJ3 421 aaKnown RBP11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 CCDC186Q7Z3E2 898 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 TRIM69Q86WT6 500 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 ZNF557Q8N988 423 aaPredicted RBP11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 SSC4DQ8WTU2 575 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 HTR3CQ8WXA8 447 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 GLMNQ92990 594 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 CCDC127Q96BQ5 260 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 CGRRF1Q99675 332 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 KIAA1586Q9HCI6 787 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 ZNF71Q9NQZ8 489 aaPredicted RBP11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 CEP83Q9Y592 693 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 POLQO75417 2590 aa11.42□□□□□ -0.58
PTP4A1-207ENST00000639568 A1L4Q6 167 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 TTC34A8MYJ7 566 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 MUSKO15146 869 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 NVLO15381 856 aaKnown RBP11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 SLC31A1O15431 190 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 SLC7A4O43246 635 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 SLFN14P0C7P3 912 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 PRR29P0C7W0 189 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 KIF11P52732 1056 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 OXCT1P55809 520 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 BMT2Q1RMZ1 405 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 ZNF699Q32M78 642 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 RILPL1Q5EBL4 403 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 ZNF542PQ5EBM4 170 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 ADGRF1Q5T601 910 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 RNF219Q5W0B1 726 aaPredicted RBP11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 ZNF787Q6DD87 383 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 SCARA5Q6ZMJ2 495 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 CLEC20AQ6ZU45 233 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 CCDC117Q8IWD4 279 aaPredicted RBP11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 STK40Q8N2I9 435 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 ARHGAP18Q8N392 663 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 C12orf29Q8N999 325 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms