RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 WHRNQ9P202 907 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 TRIM24O15164 1050 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 TRAP1Q12931 704 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 MAP1SQ66K74 1059 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 AGMOQ6ZNB7 445 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 UXTQ9UBK9 157 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 SERPINH1P50454 418 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 SKP1P63208 163 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 MAPK7Q13164 816 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 SPATA20Q8TB22 786 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 TSPAN16Q9UKR8 245 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 SCAMP3O14828 347 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 FAPQ12884 760 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 GNA13Q14344 377 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 CASKIN2Q8WXE0 1202 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 TRIM64BA6NI03 449 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 CCDC85CA6NKD9 419 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 TRIM66O15016 1216 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 FGRP09769 529 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 STXBP1P61764 594 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 SPIDRQ14159 915 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 TRIT1Q9H3H1 467 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 BARX2Q9UMQ3 279 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 ZNF232Q9UNY5 417 aa16.28■□□□□ 0.2
CACNA1A-221ENST00000636012 VHLP40337 213 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 TRIM28Q13263 835 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 USP45Q70EL2 814 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 AKT1S1Q96B36 256 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 ZSWIM1Q9BR11 485 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 ALKBH4Q9NXW9 302 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 MORC2Q9Y6X9 1032 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 WDR27A2RRH5 827 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 CSF1RP07333 972 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 RASA2Q15283 850 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 BRSK2Q8IWQ3 736 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 TAF6LQ9Y6J9 622 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 MYH9P35579 1960 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 TCHHQ07283 1943 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 LOC102724159A0A0B4J2E5 919 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 ZBTB14O43829 449 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 MPOP05164 745 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 IL6P05231 212 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 IRX1P78414 480 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 PWP2Q15269 919 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 FSCN1Q16658 493 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 RAD9BQ6WBX8 426 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 TXNRD3Q86VQ6 643 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 TMEM79Q9BSE2 394 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 TNFSF13BQ9Y275 285 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 LYVE1Q9Y5Y7 322 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 PLA2R1Q13018 1463 aa16.27■□□□□ 0.2
CACNA1A-221ENST00000636012 VEGFAP15692 232 aaPredicted RBP16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 MAGEC3Q8TD91 643 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 PPP1R13LQ8WUF5 828 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 ZDHHC15Q96MV8 337 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 UNC13BO14795 1591 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 CES2O00748 559 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 NKRFO15226 690 aaKnown RBP eCLIP16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 INPP4BO15327 924 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 OR10H2O60403 315 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 NTSR2O95665 410 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 PLK1P53350 603 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 TSNQ15631 228 aaKnown RBP16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 TSGA10IPQ3SY00 556 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 TCHHL1Q5QJ38 904 aaPredicted RBP16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 TRIQKQ629K1 86 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 FBXO39Q8N4B4 442 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 MCOLN3Q8TDD5 553 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 MAGEB18Q96M61 343 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 SLITRK2Q9H156 845 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 ACOT9Q9Y305 439 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 RPLP2P05387 115 aaKnown RBP16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 CPA3P15088 417 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 SCAIQ8N9R8 606 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 ENGASEQ8NFI3 743 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 MID1IP1Q9NPA3 183 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 AP4S1Q9Y587 144 aa16.27■□□□□ 0.19
CACNA1A-221ENST00000636012 PPP1R3GB7ZBB8 358 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 ATP5BP06576 529 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 ZCCHC18P0CG32 403 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 IL1R1P14778 569 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 CDH8P55286 799 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 DNAJC14Q6Y2X3 702 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 KCNMB4Q86W47 210 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 TMEM132CQ8N3T6 1108 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 CXorf40AQ8TE69 158 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 A1CFQ9NQ94 594 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 SAE1Q9UBE0 346 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 NUDT5Q9UKK9 219 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 BGNP21810 368 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 KCNMA1Q12791 1236 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 IKBKEQ14164 716 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 FAM98BQ52LJ0 330 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 DUSP10Q9Y6W6 482 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 ZNF7P17097 686 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 RRM1P23921 792 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 BEX3Q00994 111 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 PPIL2Q13356 520 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 MILR1Q7Z6M3 343 aa16.26■□□□□ 0.19
CACNA1A-221ENST00000636012 VPS33AQ96AX1 596 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms