RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 CSRP2Q16527 193 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 PRICKLE4Q2TBC4 344 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 MGAT5BQ3V5L5 792 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 CTXN3Q4LDR2 81 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 UBXN11Q5T124 520 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 ANO7Q6IWH7 933 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 SLC30A6Q6NXT4 461 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 CDC42EP5Q6NZY7 148 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 SLC22A25Q6T423 547 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 SYNE3Q6ZMZ3 975 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 ADGRE4PQ86SQ3 457 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 XYLT1Q86Y38 959 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 ZFPM1Q8IX07 1006 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 TMEFF1Q8IYR6 380 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 SCYL3Q8IZE3 742 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 USP38Q8NB14 1042 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 RNF169Q8NCN4 708 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 DNAJB14Q8TBM8 379 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 KTI12Q96EK9 354 aaPredicted RBP5.04□□□□□ -1.6
CDRT1-208ENST00000630868 RADILQ96JH8 1075 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 GUCD1Q96NT3 240 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.04□□□□□ -1.6
CDRT1-208ENST00000630868 SIK2Q9H0K1 926 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 SLC25A18Q9H1K4 315 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 ZSCAN32Q9NX65 697 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 ZDHHC7Q9NXF8 308 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 VSX1Q9NZR4 365 aaPredicted RBP5.04□□□□□ -1.6
CDRT1-208ENST00000630868 PCDHGB4Q9UN71 923 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 CAMK2AQ9UQM7 478 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 NAALADL1Q9UQQ1 740 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 PHIPQ8WWQ0 1821 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 MYO9BQ13459 2157 aa5.04□□□□□ -1.6
CDRT1-208ENST00000630868 PFASO15067 1338 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 FANCIQ9NVI1 1328 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 hCG_1807616A0A1W2PRN6 198 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 CCDC78A2IDD5 438 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 B5MCH6 92 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 AGPSO00116 658 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 AP3D1O14617 1153 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 ZSCAN9O15535 394 aaPredicted RBP5.03□□□□□ -1.6
CDRT1-208ENST00000630868 DKC1O60832 514 aaKnown RBP eCLIP5.03□□□□□ -1.6
CDRT1-208ENST00000630868 ENTPD3O75355 529 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 CYP7B1O75881 506 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 CLEC3BP05452 202 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 FCER1AP12319 257 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 MCM2P49736 904 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 RNASE9P60153 205 aaKnown RBP5.03□□□□□ -1.6
CDRT1-208ENST00000630868 SRSF3P84103 164 aaKnown RBP5.03□□□□□ -1.6
CDRT1-208ENST00000630868 SF3A3Q12874 501 aaKnown RBP eCLIP5.03□□□□□ -1.6
CDRT1-208ENST00000630868 TDGQ13569 410 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 UBXN2BQ14CS0 331 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 TBCCQ15814 346 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 CAVIN4Q5BKX8 364 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 NOMO2Q5JPE7 1267 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 Q6ZUG5 572 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 CPLX4Q7Z7G2 160 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 ZNF605Q86T29 641 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 IGDCC3Q8IVU1 814 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 REXO1L1PQ8IX06 675 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 DIS3L2Q8IYB7 885 aaKnown RBP5.03□□□□□ -1.6
CDRT1-208ENST00000630868 PSD4Q8NDX1 1056 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 SLC22A17Q8WUG5 538 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 HMGB4Q8WW32 186 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 APOPT1Q96IL0 206 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 MOGAT1Q96PD6 335 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 FUZQ9BT04 418 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 HERC2P3Q9BVR0 1158 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 IDI2Q9BXS1 227 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 TXLNGYQ9BZA5 131 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 ZNF552Q9H707 407 aaPredicted RBP5.03□□□□□ -1.6
CDRT1-208ENST00000630868 CXorf36Q9H7Y0 433 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 IL23AQ9NPF7 189 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 PLA2G3Q9NZ20 509 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 FAM30AQ9NZY2 134 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 DNAJB11Q9UBS4 358 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 AGTPBP1Q9UPW5 1226 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 SHOC2Q9UQ13 582 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 CDYLQ9Y232 598 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 MRPS17Q9Y2R5 130 aaKnown RBP5.03□□□□□ -1.6
CDRT1-208ENST00000630868 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.03□□□□□ -1.6
CDRT1-208ENST00000630868 ZHX2Q9Y6X8 837 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 AK9Q5TCS8 1911 aa5.03□□□□□ -1.6
CDRT1-208ENST00000630868 DDX60LQ5H9U9 1706 aaKnown RBP5.03□□□□□ -1.6
CDRT1-208ENST00000630868 GAKO14976 1311 aa5.02□□□□□ -1.61
CDRT1-208ENST00000630868 SALL1Q9NSC2 1324 aa5.02□□□□□ -1.61
CDRT1-208ENST00000630868 SLC38A8A6NNN8 435 aa5.02□□□□□ -1.61
CDRT1-208ENST00000630868 AGAP14A8MT82 685 aa5.02□□□□□ -1.61
CDRT1-208ENST00000630868 EFCAB8A8MWE9 144 aa5.02□□□□□ -1.61
CDRT1-208ENST00000630868 MASP2O00187 686 aa5.02□□□□□ -1.61
CDRT1-208ENST00000630868 CD3EAPO15446 510 aaKnown RBP5.02□□□□□ -1.61
CDRT1-208ENST00000630868 RGS10O43665 173 aa5.02□□□□□ -1.61
CDRT1-208ENST00000630868 CBFA2T3O75081 653 aa5.02□□□□□ -1.61
CDRT1-208ENST00000630868 ADAMTS4O75173 837 aa5.02□□□□□ -1.61
CDRT1-208ENST00000630868 PGM3O95394 542 aa5.02□□□□□ -1.61
CDRT1-208ENST00000630868 PLA2G1BP04054 148 aaKnown RBP5.02□□□□□ -1.61
CDRT1-208ENST00000630868 ATXN1LP0C7T5 689 aaKnown RBP5.02□□□□□ -1.61
CDRT1-208ENST00000630868 LAMP2P13473 410 aa5.02□□□□□ -1.61
CDRT1-208ENST00000630868 EPHA8P29322 1005 aaPredicted RBP5.02□□□□□ -1.61
CDRT1-208ENST00000630868 HTR7P34969 479 aa5.02□□□□□ -1.61
CDRT1-208ENST00000630868 PGM1P36871 562 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms