RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 Q6ZSN1 163 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 TSHZ1Q6ZSZ6 1077 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 LIMS2Q7Z4I7 341 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 PPP1R32Q7Z5V6 425 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 LIX1LQ8IVB5 337 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 CCDC105Q8IYK2 499 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 VPS37AQ8NEZ2 397 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 SUSD6Q92537 303 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 SEPT8Q92599 483 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 TBC1D5Q92609 795 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 RUBCNQ92622 972 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 VKORC1Q9BQB6 163 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 POMKQ9H5K3 350 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 ZCCHC4Q9H5U6 513 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 ERVK-5Q9HDB9 667 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 ARFGAP3Q9NP61 516 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 SMC4Q9NTJ3 1288 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 GPRC5BQ9NZH0 403 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 CCPG1Q9ULG6 757 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 AGAP1Q9UPQ3 857 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 SORCS3Q9UPU3 1222 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 NAV2Q8IVL1 2488 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 C5orf67F2Z3F1 127 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 RRP9O43818 475 aaKnown RBP6.02□□□□□ -1.45
SF3B3-214ENST00000572365 MMP1P03956 469 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 RB1P06400 928 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 GRPP07492 148 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 COMTP21964 271 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 PTTG1IPP53801 180 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 LPAL2Q16609 132 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 GRAMD1BQ3KR37 738 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 NOMO2Q5JPE7 1267 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 FAM102AQ5T9C2 384 aaPredicted RBP6.02□□□□□ -1.45
SF3B3-214ENST00000572365 AGAP9Q5VTM2 703 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 PLPP4Q5VZY2 271 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 HIBCHQ6NVY1 386 aaPredicted RBP6.02□□□□□ -1.45
SF3B3-214ENST00000572365 ERAP2Q6P179 960 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 SPOCD1Q6ZMY3 1216 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 SKAP1Q86WV1 359 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 GSPT2Q8IYD1 628 aaKnown RBP6.02□□□□□ -1.45
SF3B3-214ENST00000572365 CCDC33Q8N5R6 958 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 ATP11CQ8NB49 1132 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 PDPRQ8NCN5 879 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 KIAA1191Q96A73 305 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 RBM15Q96T37 977 aaKnown RBP eCLIP6.02□□□□□ -1.45
SF3B3-214ENST00000572365 IMPG2Q9BZV3 1241 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 WDR12Q9GZL7 423 aaKnown RBP6.02□□□□□ -1.45
SF3B3-214ENST00000572365 PTPRHQ9HD43 1115 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 CA14Q9ULX7 337 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 SLC4A4Q9Y6R1 1079 aa6.02□□□□□ -1.45
SF3B3-214ENST00000572365 MYH7P12883 1935 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 COL4A3Q01955 1670 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 ASXL3Q9C0F0 2248 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 MBD3L4A6NDZ8 208 aaPredicted RBP6.01□□□□□ -1.45
SF3B3-214ENST00000572365 MBD3L3A6NE82 208 aaPredicted RBP6.01□□□□□ -1.45
SF3B3-214ENST00000572365 CAPN14A8MX76 684 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 APOL1O14791 398 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 NMT2O60551 498 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 ADRB1P08588 477 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 SP9P0CG40 484 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 GHRP10912 638 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 AOC1P19801 751 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 CASTP20810 708 aaKnown RBP6.01□□□□□ -1.45
SF3B3-214ENST00000572365 FDXRP22570 491 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 PPM1AP35813 382 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 UCP3P55916 312 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 ARHGAP1Q07960 439 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 PMS2P11Q13670 270 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 DHX8Q14562 1220 aaKnown RBP6.01□□□□□ -1.45
SF3B3-214ENST00000572365 SPOUT1Q5T280 376 aaKnown RBP6.01□□□□□ -1.45
SF3B3-214ENST00000572365 KLHDC7AQ5VTJ3 777 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 FAM160B1Q5W0V3 765 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 ANKRD54Q6NXT1 300 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 SGMS1Q86VZ5 419 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 RHOT2Q8IXI1 618 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 UBALD2Q8IYN6 164 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 FAM9BQ8IZU0 186 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 SUMF1Q8NBK3 374 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 ATP8B4Q8TF62 1192 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 SCFD2Q8WU76 684 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 ATP6V0A1Q93050 837 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 ZBTB10Q96DT7 871 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 SNX22Q96L94 193 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 NEK1Q96PY6 1258 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 NEU1Q99519 415 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 MNTQ99583 582 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 CNPPD1Q9BV87 410 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 SPATA5L1Q9BVQ7 753 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 TLR10Q9BXR5 811 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 LMAN2LQ9H0V9 348 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 VPS11Q9H270 941 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 IL1RAPL2Q9NP60 686 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 SERHLQ9NQF3 203 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 NYAP2Q9P242 653 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 MYO1AQ9UBC5 1043 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 CEP295Q9C0D2 2601 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 MYH6P13533 1939 aa6.01□□□□□ -1.45
SF3B3-214ENST00000572365 GREB1LQ9C091 1923 aaPredicted RBP6.01□□□□□ -1.45
SF3B3-214ENST00000572365 ARID1BQ8NFD5 2236 aaPredicted RBP6.01□□□□□ -1.45
SF3B3-214ENST00000572365 ADGRA3Q8IWK6 1321 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms