RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 TMEM65Q6PI78 240 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 DCDC5Q6ZRR9 648 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 CCDC117Q8IWD4 279 aaPredicted RBP4.17□□□□□ -1.74
HDAC2-208ENST00000520746 OR1N1Q8NGS0 311 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 ADAMTS18Q8TE60 1221 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 SLC22A17Q8WUG5 538 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 CUL5Q93034 780 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 EID2BQ96D98 161 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 MCRS1Q96EZ8 462 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 PAGR1Q9BTK6 254 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 EFHD1Q9BUP0 239 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 MAGEH1Q9H213 219 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 FBXO28Q9NVF7 368 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 FZD4Q9ULV1 537 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 NLRP1Q9C000 1473 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 DNMT1P26358 1616 aaKnown RBP4.17□□□□□ -1.74
HDAC2-208ENST00000520746 PREX2Q70Z35 1606 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 MYO3AQ8NEV4 1616 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 TCF20Q9UGU0 1960 aaKnown RBP4.16□□□□□ -1.74
HDAC2-208ENST00000520746 ITSN2Q9NZM3 1697 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 LRRC7Q96NW7 1537 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 MSH6P52701 1360 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 TMEM94Q12767 1356 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 RTEL1-TNFRSF6BF6WH68 1400 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 FAM90A8PA6NJQ4 464 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 M0QZQ0 153 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 CLIC1O00299 241 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 RPP40O75818 363 aaKnown RBP4.16□□□□□ -1.74
HDAC2-208ENST00000520746 ACTL6BO94805 426 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 FAM90A13PP0C7W8 464 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 FAM90A24PP0C7X0 464 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 HALP42357 657 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 JAK3P52333 1124 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 POLE2P56282 527 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 RAE1P78406 368 aaKnown RBP4.16□□□□□ -1.74
HDAC2-208ENST00000520746 GHRHRQ02643 423 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 IDI1Q13907 227 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 SEMA3AQ14563 771 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 TIGD6Q17RP2 521 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 TMEM63BQ5T3F8 832 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 LINC01465Q8N7H1 131 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 FYTTD1Q96QD9 318 aaKnown RBP4.16□□□□□ -1.74
HDAC2-208ENST00000520746 RTKNQ9BST9 563 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 SORBS1Q9BX66 1292 aaKnown RBP4.16□□□□□ -1.74
HDAC2-208ENST00000520746 BRD8Q9H0E9 1235 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 RXFP3Q9NSD7 469 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 MORC2Q9Y6X9 1032 aaPredicted RBP4.16□□□□□ -1.74
HDAC2-208ENST00000520746 PZPP20742 1482 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 FYCO1Q9BQS8 1478 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 MROH2AA6NES4 1674 aa4.16□□□□□ -1.74
HDAC2-208ENST00000520746 FAM135BQ49AJ0 1406 aa4.15□□□□□ -1.74
HDAC2-208ENST00000520746 KIF28PB7ZC32 967 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 BTBD19C9JJ37 291 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 PPP6R2O75170 966 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 TOMM40O96008 361 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 MBPP02686 304 aaPredicted RBP4.15□□□□□ -1.75
HDAC2-208ENST00000520746 THBS4P35443 961 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 GRK6P43250 576 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 AP2B1P63010 937 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 SRSF1Q07955 248 aaKnown RBP eCLIP4.15□□□□□ -1.75
HDAC2-208ENST00000520746 CBFBQ13951 182 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 KCNB1Q14721 858 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 LARS2Q15031 903 aaKnown RBP4.15□□□□□ -1.75
HDAC2-208ENST00000520746 C4orf46Q504U0 113 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 AWAT1Q58HT5 328 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 ZNF569Q5MCW4 686 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 ANKRD40Q6AI12 368 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 LIN54Q6MZP7 749 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 ACSM6Q6P461 480 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 VSTM1Q6UX27 236 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 TRABD2AQ86V40 505 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 SLC44A2Q8IWA5 706 aaPredicted RBP4.15□□□□□ -1.75
HDAC2-208ENST00000520746 ANKRD42Q8N9B4 389 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 SCAMP5Q8TAC9 235 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.15□□□□□ -1.75
HDAC2-208ENST00000520746 ZNF398Q8TD17 642 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 TRAPPC12Q8WVT3 735 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 RUBCNQ92622 972 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 KAZALD1Q96I82 304 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 REXO5Q96IC2 774 aaKnown RBP4.15□□□□□ -1.75
HDAC2-208ENST00000520746 PAAF1Q9BRP4 392 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 HERPUD2Q9BSE4 406 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 MYLK2Q9H1R3 596 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 CCDC134Q9H6E4 229 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 MLXIPQ9HAP2 919 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 AGO4Q9HCK5 861 aaKnown RBP4.15□□□□□ -1.75
HDAC2-208ENST00000520746 ABHD10Q9NUJ1 306 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 ZNF112Q9UJU3 913 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 NFU1Q9UMS0 254 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 RIPOR2Q9Y4F9 1068 aa4.15□□□□□ -1.75
HDAC2-208ENST00000520746 JCADQ9P266 1359 aa4.14□□□□□ -1.75
HDAC2-208ENST00000520746 CCDC141Q6ZP82 1450 aa4.14□□□□□ -1.75
HDAC2-208ENST00000520746 SCAF11Q99590 1463 aaKnown RBP4.14□□□□□ -1.75
HDAC2-208ENST00000520746 GXYLT2A0PJZ3 443 aa4.14□□□□□ -1.75
HDAC2-208ENST00000520746 TMEM232C9JQI7 657 aa4.14□□□□□ -1.75
HDAC2-208ENST00000520746 M0QYT0 321 aa4.14□□□□□ -1.75
HDAC2-208ENST00000520746 GTPBP1O00178 669 aaKnown RBP4.14□□□□□ -1.75
HDAC2-208ENST00000520746 SMAD6O43541 496 aaKnown RBP4.14□□□□□ -1.75
HDAC2-208ENST00000520746 EIF3JO75822 258 aaKnown RBP4.14□□□□□ -1.75
HDAC2-208ENST00000520746 ATF7P17544 494 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms