RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	MVD	P53602	400 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TUBA4A	P68366	448 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	THOC5	Q13769	683 aa	Known RBP	5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	CEP78	Q5JTW2	689 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	CBWD5	Q5RIA9	395 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	CC2D1B	Q5T0F9	858 aa	Known RBP	5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	NAPEPLD	Q6IQ20	393 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	DHRS13	Q6UX07	377 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	VSTM1	Q6UX27	236 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	RBM44	Q6ZP01	1051 aa	Known RBP	5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	VPS52	Q8N1B4	723 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	KAT2A	Q92830	837 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	RNFT2	Q96EX2	444 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SENP7	Q9BQF6	1050 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	AGXT2	Q9BYV1	514 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	GPR63	Q9BZJ6	419 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	RIOX1	Q9H6W3	641 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ACAD9	Q9H845	621 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	KLHL13	Q9P2N7	655 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PI4KB	Q9UBF8	816 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PKP3	Q9Y446	797 aa		5.05	□□□□□ -1.6
CTNNA1-222	ENST00000520400	BICRA	Q9NZM4	1560 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SPATA31A5	Q5VU36	1347 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SPATA31A6	Q5VVP1	1343 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SPATA31A7	Q8IWB4	1347 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	WDR33	Q9C0J8	1336 aa	Known RBP	5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	FAM90A7P	A6NKC0	464 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	FAM90A22P	A8MWA6	464 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	FAM90A12P	A8MX19	464 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	FAM90A23P	A8MXZ1	464 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TMEM232	C9JQI7	657 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	HNRNPR	O43390	633 aa	Known RBP	5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PROP1	O75360	226 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	RBMXL2	O75526	392 aa	Known RBP	5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	WNT1	P04628	370 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ADPRH	P54922	357 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TLE2	Q04725	743 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TDG	Q13569	410 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PGM5	Q15124	567 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	JAKMIP3	Q5VZ66	844 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ATG16L1	Q676U5	607 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	RD3	Q7Z3Z2	195 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TMEM200A	Q86VY9	491 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ARL14EP	Q8N8R7	260 aa	Predicted RBP	5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	LSM14A	Q8ND56	463 aa	Known RBP	5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SRFBP1	Q8NEF9	429 aa	Known RBP	5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SEMA6D	Q8NFY4	1073 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	DDB2	Q92466	427 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ZBTB10	Q96DT7	871 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	RRP36	Q96EU6	259 aa	Known RBP	5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ADAD1	Q96M93	576 aa	Known RBP	5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	LBHD1	Q9BQE6	289 aa	Predicted RBP	5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TTYH1	Q9H313	450 aa	Predicted RBP	5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	STN1	Q9H668	368 aa	Known RBP	5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SFXN1	Q9H9B4	322 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	WASH6P	Q9NQA3	447 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ADARB2	Q9NS39	739 aa	Known RBP	5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ARL8B	Q9NVJ2	186 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	AFG3L2	Q9Y4W6	797 aa		5.04	□□□□□ -1.6
CTNNA1-222	ENST00000520400	CGB1	A6NKQ9	187 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400		A6NLC8	198 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TTC34	A8MYJ7	566 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	UBE2Q2L	H0YL09	131 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PLAU	P00749	431 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ENO1	P06733	434 aa	Known RBP	5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SLC3A2	P08195	630 aa	Known RBP	5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	MPG	P29372	298 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TYK2	P29597	1187 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PCP4	P48539	62 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	MCM2	P49736	904 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	NHLH1	Q02575	133 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.03	□□□□□ -1.6	8e-8	■■■□□ 18.1
CTNNA1-222	ENST00000520400	MTA1	Q13330	715 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PFKFB3	Q16875	520 aa	Predicted RBP	5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	KIAA1755	Q5JYT7	1200 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	WDR45B	Q5MNZ6	344 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SUMO4	Q6EEV6	95 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TMEM88	Q6PEY1	159 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	SLC30A9	Q6PML9	568 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	PRIMA1	Q86XR5	153 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	ADGRG3	Q86Y34	549 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TMEM217	Q8N7C4	229 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	OR52N4	Q8NGI2	321 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	HVCN1	Q96D96	273 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	QTRT1	Q9BXR0	403 aa	Known RBP	5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	LMAN2L	Q9H0V9	348 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	NOD2	Q9HC29	1040 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TMLHE	Q9NVH6	421 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TMEM248	Q9NWD8	314 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	CD207	Q9UJ71	328 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	DISP3	Q9P2K9	1392 aa		5.03	□□□□□ -1.6
CTNNA1-222	ENST00000520400	TCRBV7S3A2	A0A539	114 aa		5.02	□□□□□ -1.61
CTNNA1-222	ENST00000520400	MCIDAS	D6RGH6	385 aa		5.02	□□□□□ -1.61
CTNNA1-222	ENST00000520400	PEX12	O00623	359 aa		5.02	□□□□□ -1.61
CTNNA1-222	ENST00000520400	TGM2	P21980	687 aa		5.02	□□□□□ -1.61
CTNNA1-222	ENST00000520400	PTPN9	P43378	593 aa		5.02	□□□□□ -1.61
CTNNA1-222	ENST00000520400	CFHR1	Q03591	330 aa		5.02	□□□□□ -1.61
CTNNA1-222	ENST00000520400	ANXA2R	Q3ZCQ2	193 aa		5.02	□□□□□ -1.61
CTNNA1-222	ENST00000520400	FBXO43	Q4G163	708 aa		5.02	□□□□□ -1.61

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