RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 VANGL2Q9ULK5 521 aa22■■□□□ 1.11
UBE2D3-229ENST00000510129 ENDOD1O94919 500 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 TPM3P06753 285 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 PDGFRAP16234 1089 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 TNFAIP3P21580 790 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 PTPN9P43378 593 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 ECT2LQ008S8 904 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 RPL6Q02878 288 aaKnown RBP21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 IRF2BP2Q7Z5L9 587 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 FOXJ1Q92949 421 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 MYEOVQ96EZ4 313 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 CFAP57Q96MR6 1250 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 SELENOOQ9BVL4 669 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 SIK2Q9H0K1 926 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 RETREG1Q9H6L5 497 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 ITM2CQ9NQX7 267 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 USP36Q9P275 1121 aaKnown RBP21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 MBD1Q9UIS9 605 aaPredicted RBP21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 GPR179Q6PRD1 2367 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 CKAP5Q14008 2032 aa21.99■■□□□ 1.11
UBE2D3-229ENST00000510129 ZNF292O60281 2723 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 RALGAPA1Q6GYQ0 2036 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 IGHV1OR15-9A0A0B4J2B8 117 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 LRRC53A6NM62 1247 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 ADCY5O95622 1261 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 IGLV3-19P01714 112 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 UBASH3AP57075 661 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 FANCCQ00597 558 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 ASIC2Q16515 512 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 FSCBQ5H9T9 825 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 LYSMD4Q5XG99 296 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 STRADAQ7RTN6 431 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 NAP1L5Q96NT1 182 aaPredicted RBP21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 MKRN2Q9H000 416 aaKnown RBP21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 INTS6Q9UL03 887 aaKnown RBP21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 SCML1Q9UN30 329 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 CYP8B1Q9UNU6 501 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 ERVW-1Q9UQF0 538 aa21.98■■□□□ 1.11
UBE2D3-229ENST00000510129 MUC22E2RYF6 1773 aaPredicted RBP21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 TARSL2A2RTX5 802 aaKnown RBP21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 C2CD4BA6NLJ0 364 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 SIGLEC16A6NMB1 481 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 RNASEH1O60930 286 aaKnown RBP21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 TFE3P19532 575 aaPredicted RBP21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 CD6P30203 668 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 VASPP50552 380 aaPredicted RBP21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 COPAP53621 1224 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 PTP4A2Q12974 167 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 HNRNPA1L2Q32P51 320 aaKnown RBP21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 AASDHQ4L235 1098 aaPredicted RBP21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 ACAD10Q6JQN1 1059 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 LRSAM1Q6UWE0 723 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 MON1BQ7L1V2 547 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 SETD3Q86TU7 594 aaPredicted RBP21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 SYT12Q8IV01 421 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 TMEFF1Q8IYR6 380 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 RXFP2Q8WXD0 754 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 IGSF8Q969P0 613 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 RTKNQ9BST9 563 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 DLL3Q9NYJ7 618 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 TBC1D30Q9Y2I9 924 aa21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 BZW2Q9Y6E2 419 aaKnown RBP21.97■■□□□ 1.11
UBE2D3-229ENST00000510129 THADAQ6YHU6 1953 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 KHNYNO15037 678 aaKnown RBP21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 HLA-EP13747 358 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 PRKCIP41743 596 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 LIMK1P53667 647 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 ATP11AP98196 1134 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 RSPO4Q2I0M5 234 aaPredicted RBP21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 TTC31Q49AM3 519 aaPredicted RBP21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 SYCP2LQ5T4T6 812 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 C6orf118Q5T5N4 469 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 DNAJC24Q6P3W2 148 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 ERMP1Q7Z2K6 904 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 EMC1Q8N766 993 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 CEP76Q8TAP6 659 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 ADAM33Q9BZ11 813 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 PCED1AQ9H1Q7 454 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 PRSS16Q9NQE7 514 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 ITIH6Q6UXX5 1313 aa21.96■■□□□ 1.11
UBE2D3-229ENST00000510129 IGLV3-10A0A075B6K4 115 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 EDDM13A0A1B0GTR0 161 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 A0A1W2PQJ5 194 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 DRGXA6NNA5 263 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 GZMAP12544 262 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 GPD1P21695 349 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 TPMTP51580 245 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 ZNF33AQ06730 810 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 CCDC14Q49A88 953 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 ZNF776Q68DI1 518 aaPredicted RBP21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 CXorf57Q6NSI4 855 aaKnown RBP21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 TRNP1Q6NT89 227 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 ZNF783Q6ZMS7 281 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 FAM131BQ86XD5 332 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 CADM4Q8NFZ8 388 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 PIGKQ92643 395 aa21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 CENPIQ92674 756 aaPredicted RBP21.95■■□□□ 1.1
UBE2D3-229ENST00000510129 SYN2Q92777 582 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms