RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 PRMT1Q99873 361 aaKnown RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 C11orf70Q9BRQ4 267 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 EDEM3Q9BZQ6 932 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 TKTL2Q9H0I9 626 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 WDCPQ9H6R7 721 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 PRDM16Q9HAZ2 1276 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 ANLNQ9NQW6 1124 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 METTL5Q9NRN9 209 aaKnown RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 INTS6Q9UL03 887 aaKnown RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 VANGL2Q9ULK5 521 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 STAP1Q9ULZ2 295 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 CAPN11Q9UMQ6 739 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 LUC7L2Q9Y383 392 aaKnown RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 DAAM1Q9Y4D1 1078 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 HS3ST4Q9Y661 456 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 SDK1Q7Z5N4 2213 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 MYO18AQ92614 2054 aaKnown RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 DNAH14Q0VDD8 3507 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 ATXN2Q99700 1313 aaKnown RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 BCLAF3A2AJT9 711 aaKnown RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 PRR5-ARHGAP8B1AHC4 643 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 ESPNB1AK53 854 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 PATE3B3GLJ2 98 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 I6L893 689 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 NPC1O15118 1278 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 MFAP3LO75121 409 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 GYPCP04921 128 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 ATP5BP06576 529 aaKnown RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 DLDP09622 509 aaKnown RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 ZNF806P0C7X5 589 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 SKILP12757 684 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 UNGP13051 313 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 PDGFRAP16234 1089 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 MMP8P22894 467 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 MZF1P28698 734 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 CASP14P31944 242 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 CXCR3P49682 368 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 COPAP53621 1224 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 ARHGAP8P85298 464 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 ATP11AP98196 1134 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 CDO1Q16878 200 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 CLEC16AQ2KHT3 1053 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 SLC25A52Q3SY17 297 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 RAB6CQ53S08 254 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 PITRM1Q5JRX3 1037 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 PLA2G2CQ5R387 149 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 SH3PXD2AQ5TCZ1 1133 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 SND1Q7KZF4 910 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 CYP2U1Q7Z449 544 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 CCAR2Q8N163 923 aaKnown RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 ZNF557Q8N988 423 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 TC2NQ8N9U0 490 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 JOSD2Q8TAC2 188 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 CPLX3Q8WVH0 158 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 PRCCQ92733 491 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 SIPA1Q96FS4 1042 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 RPL10LQ96L21 214 aaKnown RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 CFAP57Q96MR6 1250 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 ZNF830Q96NB3 372 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 AGPAT1Q99943 283 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 IRX2Q9BZI1 471 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 RAB6CQ9H0N0 254 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 TMEM245Q9H330 911 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 VPS45Q9NRW7 570 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 TMEM74BQ9NUR3 256 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 ZNHIT6Q9NWK9 470 aaKnown RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 KIAA1522Q9P206 1035 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 TMEM59LQ9UK28 342 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 CDV3Q9UKY7 258 aaKnown RBP8.54□□□□□ -1.04
HDAC6-221ENST00000477561 PCDHGA5Q9Y5G8 931 aa8.54□□□□□ -1.04
HDAC6-221ENST00000477561 DCHS1Q96JQ0 3298 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 ABCA7Q8IZY2 2146 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 SPTBN4Q9H254 2564 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 DCDC2BA2VCK2 349 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 LRRC53A6NM62 1247 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 TMCO5BA8MYB1 307 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 TTC34A8MYJ7 566 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 ARHGAP6O43182 974 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 SRGAP2O75044 1071 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 NDUFS2O75306 463 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 ZNF217O75362 1048 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 CNTN5O94779 1100 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 MOCS3O95396 460 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 ACADMP11310 421 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 FERP16591 822 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 ITPKAP23677 461 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 SCNN1AP37088 669 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 NSFP46459 744 aaKnown RBP8.53□□□□□ -1.04
HDAC6-221ENST00000477561 STK19P49842 368 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-221ENST00000477561 TPMTP51580 245 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 ADKP55263 362 aaKnown RBP8.53□□□□□ -1.04
HDAC6-221ENST00000477561 ST8SIA6P61647 398 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 ZBED6P86452 979 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 PTP4A2Q12974 167 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 PUM1Q14671 1186 aaKnown RBP eCLIP8.53□□□□□ -1.04
HDAC6-221ENST00000477561 E2F5Q15329 346 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 C15orf59Q2T9L4 293 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-221ENST00000477561 PLEKHG6Q3KR16 790 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 RABGAP1LQ5R372 815 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 LYSMD4Q5XG99 296 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms