RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 LRRC2Q9BYS8 371 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 TRIM55Q9BYV6 548 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 LRRN3Q9H3W5 708 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 MRPL40Q9NQ50 206 aaKnown RBP6.89□□□□□ -1.31
HDAC3-206ENST00000471968 SEMA3GQ9NS98 782 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 AKAP7Q9P0M2 348 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-206ENST00000471968 RCOR3Q9P2K3 495 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-206ENST00000471968 MAGEC2Q9UBF1 373 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-206ENST00000471968 CHORDC1Q9UHD1 332 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-206ENST00000471968 POLHQ9Y253 713 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 B3GALT1Q9Y5Z6 326 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 CSNK1G3Q9Y6M4 447 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 RNF215Q9Y6U7 377 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 A6NCN8 305 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 CCDC169A6NNP5 214 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 KPNA7A9QM74 516 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 F8VP50 259 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 TPP1O14773 563 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 SLC31A1O15431 190 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 SIN3BO75182 1162 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 CSF2P04141 144 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 CLTAP09496 248 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 FURINP09958 794 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 PRLRP16471 622 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 GOT1P17174 413 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 NUDT1P36639 197 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 MATR3P43243 847 aaKnown RBP eCLIP6.88□□□□□ -1.31
HDAC3-206ENST00000471968 RECQLP46063 649 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-206ENST00000471968 PSMD8P48556 350 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 MEOX1P50221 254 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 YBX1P67809 324 aaKnown RBP6.88□□□□□ -1.31
HDAC3-206ENST00000471968 RUNX1T1Q06455 604 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 ERV3-1Q14264 604 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 ARID5BQ14865 1188 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 SETMARQ53H47 684 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-206ENST00000471968 HIST2H2BDQ6DRA6 164 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 JADE1Q6IE81 842 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 ESRP1Q6NXG1 681 aaKnown RBP6.88□□□□□ -1.31
HDAC3-206ENST00000471968 MOXD1Q6UVY6 613 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 LINGO4Q6UY18 593 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-206ENST00000471968 C4orf50Q6ZRC1 276 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 TAS1R3Q7RTX0 852 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 KDELC2Q7Z4H8 507 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 NLGN4XQ8N0W4 816 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 TMEM145Q8NBT3 493 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 NLGN4YQ8NFZ3 816 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-206ENST00000471968 ITLN2Q8WWU7 325 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-206ENST00000471968 HAS1Q92839 578 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 MYLPFQ96A32 169 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 CEP295NLQ96MC4 621 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 IL25Q9H293 177 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 CHMP4BQ9H444 224 aaKnown RBP6.88□□□□□ -1.31
HDAC3-206ENST00000471968 FZD3Q9NPG1 666 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 FOXD4L1Q9NU39 408 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 GULP1Q9UBP9 304 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 SUN2Q9UH99 717 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 PCDHB3Q9Y5E6 796 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 PCDHGA3Q9Y5H0 932 aa6.88□□□□□ -1.31
HDAC3-206ENST00000471968 DPM1O60762 260 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 TOM1L1O75674 476 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 TBX18O95935 607 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 HEXAP06865 529 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 FGF3P11487 239 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-206ENST00000471968 NME1P15531 152 aaKnown RBP6.87□□□□□ -1.31
HDAC3-206ENST00000471968 YWHAQP27348 245 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 MAP4P27816 1152 aaKnown RBP6.87□□□□□ -1.31
HDAC3-206ENST00000471968 DNAJA1P31689 397 aaKnown RBP6.87□□□□□ -1.31
HDAC3-206ENST00000471968 CLDN2P57739 230 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 PSMC1P62191 440 aaKnown RBP6.87□□□□□ -1.31
HDAC3-206ENST00000471968 CYP27A1Q02318 531 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 EFHC2Q5JST6 749 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 OR6B2Q6IFH4 312 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 OSTM1Q86WC4 334 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 CEP97Q8IW35 865 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 PARP9Q8IXQ6 854 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 IQCKQ8N0W5 287 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 Q8N9G6 341 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-206ENST00000471968 PDZD8Q8NEN9 1154 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 KLK6Q92876 244 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 NINJ1Q92982 152 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 ART4Q93070 314 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 PNPLA2Q96AD5 504 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 MTA3Q9BTC8 594 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 KLF16Q9BXK1 252 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-206ENST00000471968 CCSER1Q9C0I3 900 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 KLF15Q9UIH9 416 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 PILRAQ9UKJ1 303 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 PNMA8BQ9ULN7 279 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-206ENST00000471968 L1RE1Q9UN81 338 aa6.87□□□□□ -1.31
HDAC3-206ENST00000471968 KMT2CQ8NEZ4 4911 aaKnown RBP6.87□□□□□ -1.31
HDAC3-206ENST00000471968 SCN1AP35498 2009 aa6.86□□□□□ -1.31
HDAC3-206ENST00000471968 CDC14CA4D256 554 aa6.86□□□□□ -1.31
HDAC3-206ENST00000471968 CLDN3O15551 220 aa6.86□□□□□ -1.31
HDAC3-206ENST00000471968 RNGTTO60942 597 aaKnown RBP6.86□□□□□ -1.31
HDAC3-206ENST00000471968 GCATO75600 419 aa6.86□□□□□ -1.31
HDAC3-206ENST00000471968 F12P00748 615 aaPredicted RBP6.86□□□□□ -1.31
HDAC3-206ENST00000471968 JUNDP17535 347 aa6.86□□□□□ -1.31
HDAC3-206ENST00000471968 CYP11B2P19099 503 aa6.86□□□□□ -1.31
HDAC3-206ENST00000471968 CDC27P30260 824 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms