RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 EFNA5P52803 228 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 RARSP54136 660 aaKnown RBP4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 RPL7AP62424 266 aaKnown RBP4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 SHC2P98077 582 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 SLC25A3Q00325 362 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 B4GALNT1Q00973 533 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 ITIH3Q06033 890 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 CDC16Q13042 620 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 STK4Q13043 487 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 CHAF1BQ13112 559 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 TP53BP2Q13625 1128 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 CBFBQ13951 182 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 AP5B1Q2VPB7 878 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 RUNDC3AQ59EK9 446 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 ZKSCAN2Q63HK3 967 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 SLC30A6Q6NXT4 461 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 Q6ZWC4 215 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 RNF144BQ7Z419 303 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 LAS2Q8IYD9 372 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 ADGRF3Q8IZF5 1079 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 BHLHE22Q8NFJ8 381 aaPredicted RBP4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 TNIP2Q8NFZ5 429 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 TBC1D5Q92609 795 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 CALML4Q96GE6 196 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 C5orf34Q96MH7 638 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 SNX18Q96RF0 628 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 RSPH9Q9H1X1 276 aaPredicted RBP4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 ERVK-5Q9HDB9 667 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 PDE7BQ9NP56 450 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 MRGBPQ9NV56 204 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 ZNF711Q9Y462 761 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 KCNE2Q9Y6J6 123 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 CAPN7Q9Y6W3 813 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 ZNF536O15090 1300 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 FAM237BA0A1B0GVD1 139 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 A0A1W2PQ09 198 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TSPY2A6NKD2 308 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM200CA6NKL6 621 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 C3orf70A6NLC5 250 aaPredicted RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 C16orf96A6NNT2 1141 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM232C9JQI7 657 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 CES2O00748 559 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 UBE2CO00762 179 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 PRYO14603 147 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ADAM20O43506 726 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TJP3O95049 919 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 C1RP00736 705 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ALDOAP04075 364 aaKnown RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TSPY3P0CV98 308 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TSPY8P0CW00 308 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 VDRP11473 427 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ZNF37AP17032 561 aaPredicted RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 DDX6P26196 483 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 DUSP1P28562 367 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 BMPR1AP36894 532 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 PSMB10P40306 273 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 STAT6P42226 847 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 JAK3P52333 1124 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SLC37A1P57057 533 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 NXPH1P58417 271 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 EFNB1P98172 346 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TSPY1Q01534 308 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ABHD18Q0P651 414 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 LMAN2Q12907 356 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 EPS8Q12929 822 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ALKBH1Q13686 389 aaKnown RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 BYSLQ13895 437 aaKnown RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SLC18A3Q16572 532 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SPDYE7PQ495Y7 208 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ZNF618Q5T7W0 954 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 MCTP1Q6DN14 999 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 GJB7Q6PEY0 223 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SLC39A5Q6ZMH5 540 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 RTL10Q7L3V2 364 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 NBPF11Q86T75 865 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 PRPF39Q86UA1 669 aaKnown RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 CIR1Q86X95 450 aaPredicted RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 BRSK2Q8IWQ3 736 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ULK2Q8IYT8 1036 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 VPS52Q8N1B4 723 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 C12orf76Q8N812 135 aaPredicted RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 FRMD1Q8N878 549 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SETD9Q8NE22 299 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 FEZF2Q8TBJ5 459 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 CNOT9Q92600 299 aaKnown RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ATP2A3Q93084 1043 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 PTCD3Q96EY7 689 aaKnown RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 KLHL15Q96M94 604 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 BAG1Q99933 345 aaPredicted RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 THAP7Q9BT49 309 aaPredicted RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 HTATIP2Q9BUP3 242 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SLC32A1Q9H598 525 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 POLR1BQ9H9Y6 1135 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 KLC4Q9NSK0 619 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 DLL3Q9NYJ7 618 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 FZD4Q9ULV1 537 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SH2B3Q9UQQ2 575 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 OSGIN2Q9Y236 505 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 BTBD18B2RXH4 712 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 LIASO43766 372 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms