RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ECT2LQ008S8 904 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 CENPCQ03188 943 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 SULT2A1Q06520 285 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 ZNF33AQ06730 810 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 CAMK2GQ13555 558 aaPredicted RBP11.56□□□□□ -0.56
RFFL-204ENST00000414419 IQCB1Q15051 598 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 PTPRNQ16849 979 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 CLEC16AQ2KHT3 1053 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 PLEKHG6Q3KR16 790 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 DGLUCYQ7Z3D6 616 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 PHLDB2Q86SQ0 1253 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 METTL3Q86U44 580 aaKnown RBP11.56□□□□□ -0.56
RFFL-204ENST00000414419 CACUL1Q86Y37 369 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 DEFB119Q8N690 84 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 ZNF366Q8N895 744 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 RTKNQ9BST9 563 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 MKRN2Q9H000 416 aaKnown RBP11.56□□□□□ -0.56
RFFL-204ENST00000414419 SMOC1Q9H4F8 434 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 CBX8Q9HC52 389 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 ITM2CQ9NQX7 267 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 ARHGEF38Q9NXL2 777 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 DLL3Q9NYJ7 618 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 TMEM59LQ9UK28 342 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 MYO6Q9UM54 1294 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 ERVW-1Q9UQF0 538 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 MUC22E2RYF6 1773 aaPredicted RBP11.55□□□□□ -0.56
RFFL-204ENST00000414419 A0A1B0GTH6 734 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 A0A1W2PQC6 194 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 ANKRD62A6NC57 917 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 GDF9O60383 454 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 RNASEH1O60930 286 aaKnown RBP11.55□□□□□ -0.56
RFFL-204ENST00000414419 CLDN11O75508 207 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 KRT3P12035 628 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 DESP17661 470 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 TFE3P19532 575 aaPredicted RBP11.55□□□□□ -0.56
RFFL-204ENST00000414419 GGCXP38435 758 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 PTGER3P43115 390 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 TPMTP51580 245 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 COPAP53621 1224 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 CDH4P55283 916 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 CDO1Q16878 200 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 ARL13BQ3SXY8 428 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 SYCP2LQ5T4T6 812 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 IL31Q6EBC2 164 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 PPP1R2P3Q6NXS1 205 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 LUZP1Q86V48 1076 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 CIR1Q86X95 450 aaPredicted RBP11.55□□□□□ -0.56
RFFL-204ENST00000414419 PHF13Q86YI8 300 aaPredicted RBP11.55□□□□□ -0.56
RFFL-204ENST00000414419 SYT12Q8IV01 421 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 RGL4Q8IZJ4 473 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 APCDD1Q8J025 514 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 EMC1Q8N766 993 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 KDM1BQ8NB78 822 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 RXFP2Q8WXD0 754 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 FOXJ1Q92949 421 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 IGSF8Q969P0 613 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 LMLNQ96KR4 655 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 C1orf74Q96LT6 269 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 PCDHB18PQ96TA0 734 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 NUP58Q9BVL2 599 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 NUSAP1Q9BXS6 441 aaKnown RBP11.55□□□□□ -0.56
RFFL-204ENST00000414419 PRSS16Q9NQE7 514 aa11.55□□□□□ -0.56
RFFL-204ENST00000414419 INTS6Q9UL03 887 aaKnown RBP11.55□□□□□ -0.56
RFFL-204ENST00000414419 ADAMTS9Q9P2N4 1935 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 NUMA1Q14980 2115 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 LRRC53A6NM62 1247 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 SRGAP2O75044 1071 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 DNTTP04053 509 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 ATXN1P54253 815 aaKnown RBP11.54□□□□□ -0.56
RFFL-204ENST00000414419 UBASH3AP57075 661 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 ZBTB16Q05516 673 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 SFSWAPQ12872 951 aaKnown RBP11.54□□□□□ -0.56
RFFL-204ENST00000414419 NR1I3Q14994 352 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 ASIC2Q16515 512 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 TTC31Q49AM3 519 aaPredicted RBP11.54□□□□□ -0.56
RFFL-204ENST00000414419 TRIM61Q5EBN2 209 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 WDR45BQ5MNZ6 344 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 SFMBT2Q5VUG0 894 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 OTUD1Q5VV17 481 aaPredicted RBP11.54□□□□□ -0.56
RFFL-204ENST00000414419 ZNF776Q68DI1 518 aaPredicted RBP11.54□□□□□ -0.56
RFFL-204ENST00000414419 TCEAL6Q6IPX3 200 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 ACAD10Q6JQN1 1059 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 ERMP1Q7Z2K6 904 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 RABEPKQ7Z6M1 372 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 FAM124AQ86V42 546 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 FAM131BQ86XD5 332 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 CEP76Q8TAP6 659 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 TCEAL3Q969E4 200 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 TOE1Q96GM8 510 aaKnown RBP11.54□□□□□ -0.56
RFFL-204ENST00000414419 RPL10LQ96L21 214 aaKnown RBP11.54□□□□□ -0.56
RFFL-204ENST00000414419 HSPA12BQ96MM6 686 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 NAP1L5Q96NT1 182 aaPredicted RBP11.54□□□□□ -0.56
RFFL-204ENST00000414419 HAPLN3Q96S86 360 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 GPR174Q9BXC1 333 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 ADAM33Q9BZ11 813 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 MUC3BQ9H195 1237 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 CD93Q9NPY3 652 aa11.54□□□□□ -0.56
RFFL-204ENST00000414419 WSB2Q9NYS7 404 aaPredicted RBP11.54□□□□□ -0.56
RFFL-204ENST00000414419 USP36Q9P275 1121 aaKnown RBP11.54□□□□□ -0.56
RFFL-204ENST00000414419 SLC25A13Q9UJS0 675 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms