RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 TMEM8AQ9HCN3 771 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 TUFT1Q9NNX1 390 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 CD209Q9NNX6 404 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 KLQ9UEF7 1012 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 SYNPO2Q9UMS6 1093 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 RABL2BQ9UNT1 228 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 PLIN3O60664 434 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 GRK2P25098 689 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 BMPR1AP36894 532 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 AP3B2Q13367 1082 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 CARTPTQ16568 116 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 RFPL4BQ6ZWI9 263 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 KIAA2013Q8IYS2 634 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 APBB2Q92870 758 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 SLCO4A1Q96BD0 722 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 ACCSQ96QU6 501 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 TMEM206Q9H813 350 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 TCF7L2Q9NQB0 619 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 C20orf96Q9NUD7 363 aaPredicted RBP13.08□□□□□ -0.32
HERC3-203ENST00000407637 PARVAQ9NVD7 372 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 IPO11Q9UI26 975 aaKnown RBP13.08□□□□□ -0.32
HERC3-203ENST00000407637 CNOT6Q9ULM6 557 aaKnown RBP13.08□□□□□ -0.32
HERC3-203ENST00000407637 COQ4Q9Y3A0 265 aa13.08□□□□□ -0.32
HERC3-203ENST00000407637 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
HERC3-203ENST00000407637 SAC3D1A6NKF1 404 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 C3orf70A6NLC5 250 aaPredicted RBP13.07□□□□□ -0.32
HERC3-203ENST00000407637 GCATO75600 419 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 ZBTB7AO95365 584 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 ALOX5P09917 674 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 MYCLP1P12525 358 aaPredicted RBP13.07□□□□□ -0.32
HERC3-203ENST00000407637 GLDCP23378 1020 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 ZNF76P36508 570 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 GMPRP36959 345 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 NLRP11P59045 1033 aaKnown RBP13.07□□□□□ -0.32
HERC3-203ENST00000407637 SNAP25P60880 206 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 IFITM3Q01628 133 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 TNK2Q07912 1038 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 KCNT1Q5JUK3 1230 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 FAXCQ5TGI0 409 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 ANKRD13BQ86YJ7 626 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 ZC3H15Q8WU90 426 aaKnown RBP13.07□□□□□ -0.32
HERC3-203ENST00000407637 BHMTQ93088 406 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 PPWD1Q96BP3 646 aaKnown RBP13.07□□□□□ -0.32
HERC3-203ENST00000407637 ZNF347Q96SE7 839 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 WDR55Q9H6Y2 383 aaPredicted RBP13.07□□□□□ -0.32
HERC3-203ENST00000407637 TMEM9Q9P0T7 183 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 SLC17A6Q9P2U8 582 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 C9IYK1 514 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 GPR25O00155 361 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 TGM1P22735 817 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 MYF6P23409 242 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 ADSLP30566 484 aaPredicted RBP13.07□□□□□ -0.32
HERC3-203ENST00000407637 YAP1P46937 504 aaKnown RBP13.07□□□□□ -0.32
HERC3-203ENST00000407637 ART3Q13508 389 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 SLC27A3Q5K4L6 730 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 CHSY3Q70JA7 882 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 ZNF677Q86XU0 584 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 C12orf56Q8IXR9 622 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
HERC3-203ENST00000407637 FAF2Q96CS3 445 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 MARK4Q96L34 752 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 RTFDC1Q9BY42 306 aaPredicted RBP13.07□□□□□ -0.32
HERC3-203ENST00000407637 MARCH7Q9H992 704 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 ADA2Q9NZK5 511 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 PCDHGA11Q9Y5H2 935 aa13.07□□□□□ -0.32
HERC3-203ENST00000407637 ROBO1Q9Y6N7 1651 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 E2F8A0AVK6 867 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 ARHGEF35A5YM69 484 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 TMEM191CA6NGB0 347 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 TRIM64A6NGJ6 449 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 CLDN25C9JDP6 229 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 TIPRLO75663 272 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 TMEM191BP0C7N4 346 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 RALBP11234 206 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 PPP4CP60510 307 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 PTK2BQ14289 1009 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 ZNF846Q147U1 533 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 ATAD3BQ5T9A4 648 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 LRRC38Q5VT99 294 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 UNC5AQ6ZN44 842 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 OFCC1Q8IZS5 231 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 ABHD11Q8NFV4 315 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 FAM110BQ8TC76 370 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 FBXL20Q96IG2 436 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 NPAS2Q99743 824 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 HOXD1Q9GZZ0 328 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 MUC3BQ9H195 1237 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 GLT8D2Q9H1C3 349 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 POLE4Q9NR33 117 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 TBC1D14Q9P2M4 693 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 DGKBQ9Y6T7 804 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 ZNF839A8K0R7 811 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 TRIM38O00635 465 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 TPP1O14773 563 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 SREBF1P36956 1147 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 HARS2P49590 506 aaKnown RBP13.06□□□□□ -0.32
HERC3-203ENST00000407637 NUMBP49757 651 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 RAD23AP54725 363 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 DGKDQ16760 1214 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 ERFEQ4G0M1 354 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms