RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 HEATR6Q6AI08 1181 aaKnown RBP10.76□□□□□ -0.69
COL5A1-202ENST00000371820 FSTL4Q6MZW2 842 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 KLHDC10Q6PID8 442 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 CPLX4Q7Z7G2 160 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 NETO1Q8TDF5 533 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 TATDN2Q93075 761 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 CHFRQ96EP1 664 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 CABS1Q96KC9 395 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 CCDC77Q9BR77 488 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 AP1M1Q9BXS5 423 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 DDX47Q9H0S4 455 aaKnown RBP10.76□□□□□ -0.69
COL5A1-202ENST00000371820 CYLDQ9NQC7 956 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 SEMA4GQ9NTN9 838 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 AMACRQ9UHK6 382 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 PACSIN2Q9UNF0 486 aaPredicted RBP10.76□□□□□ -0.69
COL5A1-202ENST00000371820 SLC8A2Q9UPR5 921 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 PCDHA3Q9Y5H8 950 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.76□□□□□ -0.69
COL5A1-202ENST00000371820 DCDC2BA2VCK2 349 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 C5orf60A6NFR6 353 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 OTOL1A6NHN0 477 aaPredicted RBP10.75□□□□□ -0.69
COL5A1-202ENST00000371820 HHLA1C9JL84 531 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 FOXN3O00409 490 aaPredicted RBP10.75□□□□□ -0.69
COL5A1-202ENST00000371820 SLC30A4O14863 429 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 THAP12O43422 761 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 CYP1A2P05177 515 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 VDRP11473 427 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 CD19P15391 556 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 HOXC13P31276 330 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 DNA2P51530 1060 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 GALK1P51570 392 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 GAD2Q05329 585 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 PDCLQ13371 301 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 STILQ15468 1287 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 CSRP2Q16527 193 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 ARHGAP44Q17R89 818 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 KRT71Q3SY84 523 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 SWT1Q5T5J6 900 aaKnown RBP10.75□□□□□ -0.69
COL5A1-202ENST00000371820 NAA35Q5VZE5 725 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 BTBD8Q5XKL5 378 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 ICE2Q659A1 982 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 KCTD16Q68DU8 428 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 PKN3Q6P5Z2 889 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 TRIM72Q6ZMU5 477 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 PRR23CQ6ZRP0 262 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 NUDT18Q6ZVK8 323 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 WDR5BQ86VZ2 330 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 FAM71AQ8IYT1 594 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 CACNA2D3Q8IZS8 1091 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 PPM1KQ8N3J5 372 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 ZNF276Q8N554 614 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 CAMKK1Q8N5S9 505 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 C12orf50Q8NA57 414 aaPredicted RBP10.75□□□□□ -0.69
COL5A1-202ENST00000371820 ANKRD52Q8NB46 1076 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 SLC4A11Q8NBS3 891 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 LMO3Q8TAP4 145 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 CCHCR1Q8TD31 782 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 SLCO2A1Q92959 643 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 MAGOHBQ96A72 148 aaKnown RBP10.75□□□□□ -0.69
COL5A1-202ENST00000371820 VCPIP1Q96JH7 1222 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 KDM4CQ9H3R0 1056 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 CCSER2Q9H7U1 834 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 SEPT11Q9NVA2 429 aaKnown RBP10.75□□□□□ -0.69
COL5A1-202ENST00000371820 CLIC5Q9NZA1 410 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 SMARCAL1Q9NZC9 954 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 WHRNQ9P202 907 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 BCCIPQ9P287 314 aaKnown RBP eCLIP10.75□□□□□ -0.69
COL5A1-202ENST00000371820 DNMT3LQ9UJW3 386 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 EPG5Q9HCE0 2579 aa10.75□□□□□ -0.69
COL5A1-202ENST00000371820 TPRP12270 2363 aaKnown RBP10.75□□□□□ -0.69
COL5A1-202ENST00000371820 ACACBO00763 2458 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 CCDC163A0A0D9SF12 145 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 ESYT3A0FGR9 886 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 XPO1O14980 1071 aaKnown RBP10.74□□□□□ -0.69
COL5A1-202ENST00000371820 RGS16O15492 202 aaPredicted RBP10.74□□□□□ -0.69
COL5A1-202ENST00000371820 TTI1O43156 1089 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 CYP26A1O43174 497 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 EGFP01133 1207 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 APODP05090 189 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 CYP17A1P05093 508 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 SETSIPP0DME0 302 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 ADH5P11766 374 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 ECHS1P30084 290 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 RDXP35241 583 aaKnown RBP10.74□□□□□ -0.69
COL5A1-202ENST00000371820 ATP1A2P50993 1020 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 ZXDBP98169 803 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 ZNF844Q08AG5 666 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 BST2Q10589 180 aaKnown RBP10.74□□□□□ -0.69
COL5A1-202ENST00000371820 PTP4A2Q12974 167 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 DHCR24Q15392 516 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 HSF5Q4G112 596 aaPredicted RBP10.74□□□□□ -0.69
COL5A1-202ENST00000371820 LACTB2Q53H82 288 aaPredicted RBP10.74□□□□□ -0.69
COL5A1-202ENST00000371820 ACAD10Q6JQN1 1059 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 FOXR1Q6PIV2 292 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 GPRIN1Q7Z2K8 1008 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 PIGZQ86VD9 579 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 ADGRG2Q8IZP9 1017 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 CNPY4Q8N129 248 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 FAM160A2Q8N612 972 aaPredicted RBP10.74□□□□□ -0.69
COL5A1-202ENST00000371820 TLCD1Q96CP7 247 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms