RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ANKRD6Q9Y2G4 727 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 SNX11Q9Y5W9 270 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 NUMA1Q14980 2115 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 A0A1W2PP55 124 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 KCNK3O14649 394 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 MID1O15344 667 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 NNMTP40261 264 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 SUZ12Q15022 739 aaKnown RBP20.09■□□□□ 0.81
ITGA4-202ENST00000339307 MEA1Q16626 185 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 OR6B2Q6IFH4 312 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 CIR1Q86X95 450 aaPredicted RBP20.09■□□□□ 0.81
ITGA4-202ENST00000339307 C1orf216Q8TAB5 229 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 MYO19Q96H55 970 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 PPP1R13BQ96KQ4 1090 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 MRGPRX3Q96LB0 322 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 NOX5Q96PH1 765 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 TMEM121BQ9BXQ6 578 aaPredicted RBP20.09■□□□□ 0.81
ITGA4-202ENST00000339307 SLCO3A1Q9UIG8 710 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 SCML1Q9UN30 329 aa20.09■□□□□ 0.81
ITGA4-202ENST00000339307 USP24Q9UPU5 2620 aa20.08■□□□□ 0.81
ITGA4-202ENST00000339307 EDDM13A0A1B0GTR0 161 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 BECN2A8MW95 431 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 KCNU1A8MYU2 1149 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 SRPRAP08240 638 aaKnown RBP20.08■□□□□ 0.8
ITGA4-202ENST00000339307 PDGFRAP16234 1089 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 CD27P26842 260 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 KRT9P35527 623 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 PSMD8P48556 350 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 PTK2Q05397 1052 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 NME3Q13232 169 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 CST6Q15828 149 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 EFHC1Q5JVL4 640 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 KIAA0895LQ68EN5 471 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 CPXM1Q96SM3 734 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 NEUROG2Q9H2A3 272 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 PDCL3Q9H2J4 239 aa20.08■□□□□ 0.8
ITGA4-202ENST00000339307 CEP295Q9C0D2 2601 aa20.07■□□□□ 0.8
ITGA4-202ENST00000339307 SLC2A3P11169 496 aa20.07■□□□□ 0.8
ITGA4-202ENST00000339307 PON1P27169 355 aa20.07■□□□□ 0.8
ITGA4-202ENST00000339307 CCR1P32246 355 aa20.07■□□□□ 0.8
ITGA4-202ENST00000339307 SLC8A1P32418 973 aa20.07■□□□□ 0.8
ITGA4-202ENST00000339307 STK19P49842 368 aaPredicted RBP20.07■□□□□ 0.8
ITGA4-202ENST00000339307 C21orf59P57076 290 aa20.07■□□□□ 0.8
ITGA4-202ENST00000339307 RABGAP1LQ5R372 815 aa20.07■□□□□ 0.8
ITGA4-202ENST00000339307 C9orf64Q5T6V5 341 aa20.07■□□□□ 0.8
ITGA4-202ENST00000339307 USP30Q70CQ3 517 aa20.07■□□□□ 0.8
ITGA4-202ENST00000339307 RAB44Q7Z6P3 723 aaPredicted RBP20.07■□□□□ 0.8
ITGA4-202ENST00000339307 CCAR2Q8N163 923 aaKnown RBP20.07■□□□□ 0.8
ITGA4-202ENST00000339307 STK40Q8N2I9 435 aa20.07■□□□□ 0.8
ITGA4-202ENST00000339307 C1orf131Q8NDD1 294 aaKnown RBP20.07■□□□□ 0.8
ITGA4-202ENST00000339307 RPRD1AQ96P16 312 aaPredicted RBP20.07■□□□□ 0.8
ITGA4-202ENST00000339307 SERGEFQ9UGK8 458 aa20.07■□□□□ 0.8
ITGA4-202ENST00000339307 DNAJC12Q9UKB3 198 aa20.07■□□□□ 0.8
ITGA4-202ENST00000339307 FRYQ5TBA9 3013 aa20.06■□□□□ 0.8
ITGA4-202ENST00000339307 TARSL2A2RTX5 802 aaKnown RBP20.06■□□□□ 0.8
ITGA4-202ENST00000339307 LRRC72A6NJI9 287 aa20.06■□□□□ 0.8
ITGA4-202ENST00000339307 PES1O00541 588 aaKnown RBP20.06■□□□□ 0.8
ITGA4-202ENST00000339307 IL1BP01584 269 aa20.06■□□□□ 0.8
ITGA4-202ENST00000339307 ZNF883P0CG24 379 aa20.06■□□□□ 0.8
ITGA4-202ENST00000339307 GRIA4P48058 902 aa20.06■□□□□ 0.8
ITGA4-202ENST00000339307 GALCP54803 685 aa20.06■□□□□ 0.8
ITGA4-202ENST00000339307 IL9RQ01113 521 aa20.06■□□□□ 0.8
ITGA4-202ENST00000339307 ACCSLQ4AC99 568 aa20.06■□□□□ 0.8
ITGA4-202ENST00000339307 CCDC157Q569K6 752 aa20.06■□□□□ 0.8
ITGA4-202ENST00000339307 NCEH1Q6PIU2 408 aa20.06■□□□□ 0.8
ITGA4-202ENST00000339307 C11orf57Q6ZUT1 292 aaPredicted RBP20.06■□□□□ 0.8
ITGA4-202ENST00000339307 WDTC1Q8N5D0 677 aa20.06■□□□□ 0.8
ITGA4-202ENST00000339307 KDM1BQ8NB78 822 aa20.06■□□□□ 0.8
ITGA4-202ENST00000339307 AASDHPPTQ9NRN7 309 aa20.06■□□□□ 0.8
ITGA4-202ENST00000339307 FAM170AA1A519 330 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 FLRT2O43155 660 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 HSF2BPO75031 334 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 CBFA2T3O75081 653 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 IGLV3-25P01717 112 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 MZF1P28698 734 aaPredicted RBP20.05■□□□□ 0.8
ITGA4-202ENST00000339307 SNX16P57768 344 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 HSP90AA4PQ58FG1 418 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 FAM183BPQ6ZVS7 135 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 SLCO6A1Q86UG4 719 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 MLKLQ8NB16 471 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 OR14C36Q8NHC7 312 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 ADAMTS14Q8WXS8 1223 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 SHC3Q92529 594 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 ACE2Q9BYF1 805 aaPredicted RBP20.05■□□□□ 0.8
ITGA4-202ENST00000339307 PLCB1Q9NQ66 1216 aa20.05■□□□□ 0.8
ITGA4-202ENST00000339307 ERBB2P04626 1255 aa20.04■□□□□ 0.8
ITGA4-202ENST00000339307 IGHV4-34P06331 123 aa20.04■□□□□ 0.8
ITGA4-202ENST00000339307 GLI1P08151 1106 aa20.04■□□□□ 0.8
ITGA4-202ENST00000339307 PNMA6AP0CW24 399 aaPredicted RBP20.04■□□□□ 0.8
ITGA4-202ENST00000339307 PRKCSHP14314 528 aaPredicted RBP20.04■□□□□ 0.8
ITGA4-202ENST00000339307 RNASE9P60153 205 aaKnown RBP20.04■□□□□ 0.8
ITGA4-202ENST00000339307 SND1Q7KZF4 910 aaKnown RBP eCLIP20.04■□□□□ 0.8
ITGA4-202ENST00000339307 SLC47A2Q86VL8 602 aa20.04■□□□□ 0.8
ITGA4-202ENST00000339307 SKA1Q96BD8 255 aa20.04■□□□□ 0.8
ITGA4-202ENST00000339307 SLC6A18Q96N87 628 aa20.04■□□□□ 0.8
ITGA4-202ENST00000339307 SLC2A13Q96QE2 648 aa20.04■□□□□ 0.8
ITGA4-202ENST00000339307 CDC6Q99741 560 aa20.04■□□□□ 0.8
ITGA4-202ENST00000339307 SIK2Q9H0K1 926 aa20.04■□□□□ 0.8
ITGA4-202ENST00000339307 OSGEPQ9NPF4 335 aa20.04■□□□□ 0.8
ITGA4-202ENST00000339307 VANGL2Q9ULK5 521 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms