RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 COX4I2Q96KJ9 171 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 PLEKHG4BQ96PX9 1271 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 NCKAP1Q9Y2A7 1128 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 CPA3P15088 417 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 SYT12Q8IV01 421 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 RASSF5Q8WWW0 418 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 RBP1P09455 135 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 RXRGP48443 463 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 SNAPC2Q13487 334 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 ADGRF2Q8IZF7 708 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 ADGRG2Q8IZP9 1017 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 FBXO39Q8N4B4 442 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 OR5T3Q8NGG3 340 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 ARMCX1Q9P291 453 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 IRAK3Q9Y616 596 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 RAPGEF6Q8TEU7 1601 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 MPOP05164 745 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 ITIH4Q14624 930 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 RAB11FIP2Q7L804 512 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 TFECO14948 347 aaPredicted RBP16.69■□□□□ 0.26
PTCH1-201ENST00000331920 MAD2L1Q13257 205 aaPredicted RBP16.69■□□□□ 0.26
PTCH1-201ENST00000331920 NR1D2Q14995 579 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 FATE1Q969F0 183 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 CACNA1FO60840 1977 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 STK36Q9NRP7 1315 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 APOC1P02654 83 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 VTNP04004 478 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 IRAK1P51617 712 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 MEIOBQ8N635 442 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 ZNF248Q8NDW4 579 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 MCOLN3Q8TDD5 553 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 CSGALNACT1Q8TDX6 532 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 MYLPFQ96A32 169 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 CROTQ9UKG9 612 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 TAF6LQ9Y6J9 622 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 SPIRE1Q08AE8 756 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 MPP3Q13368 585 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 CTXN3Q4LDR2 81 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 SNAP47Q5SQN1 464 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 EXOC3L1Q86VI1 746 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 ZNF276Q8N554 614 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 OR7A2PQ8NGA2 310 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 VPS35Q96QK1 796 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 CNPPD1Q9BV87 410 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 CD3EAPO15446 510 aaKnown RBP16.69■□□□□ 0.26
PTCH1-201ENST00000331920 MAGEB2O15479 319 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 ZNF208O43345 1280 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 ULK1O75385 1050 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 C1orf189Q5VU69 101 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 SKA1Q96BD8 255 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 GMCL1Q96IK5 515 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 CBWD1Q9BRT8 395 aa16.69■□□□□ 0.26
PTCH1-201ENST00000331920 REPS1Q96D71 796 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 HGH1Q9BTY7 390 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 TCF7L2Q9NQB0 619 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 GPN3Q9UHW5 284 aaPredicted RBP16.68■□□□□ 0.26
PTCH1-201ENST00000331920 DMGDHQ9UI17 866 aaKnown RBP16.68■□□□□ 0.26
PTCH1-201ENST00000331920 CNTNAP2Q9UHC6 1331 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 BAZ2BQ9UIF8 2168 aaKnown RBP16.68■□□□□ 0.26
PTCH1-201ENST00000331920 NTSP30990 170 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 ATP6V1C2Q8NEY4 427 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 OSCP1Q8WVF1 389 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 OMDQ99983 421 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 THAP2Q9H0W7 228 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 IKZF3Q9UKT9 509 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 MINPP1Q9UNW1 487 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 NPR3P17342 541 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 FMO4P31512 558 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 BMPR2Q13873 1038 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 HLFQ16534 295 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 PRMT9Q6P2P2 845 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 C16orf59Q7L2K0 433 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 POU5F2Q8N7G0 328 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 CELF6Q96J87 481 aaKnown RBP16.68■□□□□ 0.26
PTCH1-201ENST00000331920 TIPINQ9BVW5 301 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 THG1LQ9NWX6 298 aaKnown RBP16.68■□□□□ 0.26
PTCH1-201ENST00000331920 ZNF806P0C7X5 589 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 KLRC2P26717 231 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 PPM1AP35813 382 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 SKP1P63208 163 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 EZH2Q15910 746 aaKnown RBP16.68■□□□□ 0.26
PTCH1-201ENST00000331920 FNBP1LQ5T0N5 605 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 JCHAINP01591 159 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 IFNA6P05013 189 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 MC1RQ01726 317 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 INSCQ1MX18 579 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 TMEM63BQ5T3F8 832 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 ILDR2Q71H61 639 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 CXXC5Q7LFL8 322 aaKnown RBP16.68■□□□□ 0.26
PTCH1-201ENST00000331920 ISCUQ9H1K1 167 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 CHMP1AQ9HD42 196 aaPredicted RBP16.68■□□□□ 0.26
PTCH1-201ENST00000331920 ZNHIT2Q9UHR6 403 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 TEX46H3BTG2 121 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 HAT1O14929 419 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 PRH1P02810 166 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 PRKAR1AP10644 381 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 IL18R1Q13478 541 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 FAM98AQ8NCA5 519 aaKnown RBP16.68■□□□□ 0.26
PTCH1-201ENST00000331920 OR2L3Q8NG85 312 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 SYT15Q9BQS2 421 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms