RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 RBM7Q9Y580 266 aaKnown RBP11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 CD40LGP29965 261 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 PDK1Q15118 436 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 CA9Q16790 459 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 ZNF280DQ6N043 979 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 HAGHLQ6PII5 290 aaPredicted RBP11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 NUDT18Q6ZVK8 323 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 METTL16Q86W50 562 aaKnown RBP11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 B3GALNT2Q8NCR0 500 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 KLF6Q99612 283 aaPredicted RBP11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 TMEM120AQ9BXJ8 343 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 CKLFQ9UBR5 152 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 ARL5AQ9Y689 179 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 SCN4BQ8IWT1 228 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 HNRNPLLQ8WVV9 542 aaKnown RBP11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 FRMPD1Q5SYB0 1578 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 SLC33A1O00400 549 aaPredicted RBP11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 RBM44Q6ZP01 1051 aaKnown RBP11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 DPF1Q92782 380 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 VPS33BQ9H267 617 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 DBNDD1Q9H9R9 158 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 SHOC2Q9UQ13 582 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 MRPS7Q9Y2R9 242 aaKnown RBP11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 ACADSBP45954 432 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 DDX53Q86TM3 631 aaKnown RBP11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 TOR1AIP2Q8NFQ8 470 aa11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 ZNF471Q9BX82 626 aaPredicted RBP11.39□□□□□ -0.59
HDGFL3-201ENST00000299633 PP2D1A8MPX8 630 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 RPS6KA5O75582 802 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 LDLRP01130 860 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 LINC00523Q86TU6 105 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 OR52L1Q8NGH7 329 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 STARD7Q9NQZ5 370 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 UBP1Q9NZI7 540 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 ASMTLO95671 621 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 KCNH2Q12809 1159 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 NET1Q7Z628 596 aaPredicted RBP11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 URGCPQ8TCY9 931 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 ZHX1-C8orf76Q96EF9 292 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 ZNF234Q14588 700 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 PCSK7Q16549 785 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 PLA2G4EQ3MJ16 856 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 CHRDL2Q6WN34 429 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 CHCHD4Q8N4Q1 142 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 DHRSXQ8N5I4 330 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 NAT14Q8WUY8 206 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 PIGKQ92643 395 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 DLG3Q92796 817 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 ASB14A6NK59 587 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 SLC26A4O43511 780 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 ATP6V1G1O75348 118 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 FSBPO95073 299 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 LCP1P13796 627 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 MAGEA4P43358 317 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 CDK17Q00537 523 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 C1orf94Q6P1W5 598 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 FAM131AQ6UXB0 335 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 SEMA6AQ9H2E6 1030 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 ANKZF1Q9H8Y5 726 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 SLC39A10Q9ULF5 831 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 TRIM38O00635 465 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 BMP3P12645 472 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 SLCO6A1Q86UG4 719 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 NEDD1Q8NHV4 660 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 METTL18O95568 372 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 FAM153BP0C7A2 387 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 SLC27A3Q5K4L6 730 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 ZNF574Q6ZN55 896 aaPredicted RBP11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 KDELC2Q7Z4H8 507 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 TMPRSS6Q8IU80 811 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 SPATA18Q8TC71 538 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 ITCHQ96J02 903 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 OGDHLQ9ULD0 1010 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 OR2AT4A6NND4 320 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 EPHA10Q5JZY3 1008 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 C9orf72Q96LT7 481 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 HIF3AQ9Y2N7 669 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 SULT1B1O43704 296 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 CNSTQ6PJW8 725 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 EMC1Q8N766 993 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 SMYD1Q8NB12 490 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 LIMD1Q9UGP4 676 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 RPS6KA4O75676 772 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 GCLMP48507 274 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 KCNA10Q16322 511 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 EEPD1Q7L9B9 569 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 USP38Q8NB14 1042 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 MSANTD3Q96H12 275 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 ZNF225Q9UK10 706 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 MYL4P12829 197 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 UQCRBP14927 111 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 NFKB1P19838 968 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 AVPR1AP37288 418 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 MYBPC3Q14896 1274 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 ZDHHC13Q8IUH4 622 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 GPRASP2Q96D09 838 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 WRNIP1Q96S55 665 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 AP5M1Q9H0R1 490 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 CHRAC1Q9NRG0 131 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 TBC1D14Q9P2M4 693 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms