RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 UMODL1Q5DID0 1318 aa16.79■□□□□ 0.28
SH3RF1-201ENST00000284637 SCNN1BP51168 640 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 ADIGQ0VDE8 80 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 IL17AQ16552 155 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 FBXO47Q5MNV8 452 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 DUPD1Q68J44 220 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 KYAT3Q6YP21 454 aaKnown RBP16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 HDDC2Q7Z4H3 204 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 DHRSXQ8N5I4 330 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 FNDC5Q8NAU1 212 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 PIWIL2Q8TC59 973 aaKnown RBP16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 ELOVL6Q9H5J4 265 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 POLG2Q9UHN1 485 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 WDR37Q9Y2I8 494 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 DRAXINQ8NBI3 349 aaPredicted RBP16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 INPP4AQ96PE3 977 aaPredicted RBP16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 CAPN10Q9HC96 672 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 GNG14A0A1W2PPG7 69 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 FBXO21O94952 628 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 CRTAMO95727 393 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 C4BPBP20851 252 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 KDELR1P24390 212 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 OXCT1P55809 520 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 BACE1P56817 501 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 FOLH1Q04609 750 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 LIMD1Q9UGP4 676 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 TPP1O14773 563 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 FAM20BO75063 409 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 MAPK1P28482 360 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 CRADDP78560 199 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 NECAB2Q7Z6G3 386 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 EFCAB3Q8N7B9 438 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 SPATA16Q9BXB7 569 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 GAKO14976 1311 aa16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 PPRC1Q5VV67 1664 aaKnown RBP16.78■□□□□ 0.28
SH3RF1-201ENST00000284637 A0A0B4J269 797 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 MGAT4DA6NG13 374 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 HS6ST1O60243 411 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 TRMUO75648 421 aaKnown RBP16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 SPANXN3Q5MJ09 141 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 DPY30Q9C005 99 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 WDR41Q9HAD4 459 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 SCUBE2Q9NQ36 999 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 PNMA8CA0A1B0GUJ8 204 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 PDZK1P1A8MUH7 402 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 TRDMT1O14717 391 aaKnown RBP16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 GSTM1P09488 218 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 GPC1P35052 558 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 BFSP2Q13515 415 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 NPNTQ6UXI9 565 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 TFAP2DQ7Z6R9 452 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 FAM126BQ8IXS8 530 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 COX4I2Q96KJ9 171 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 PTTG2Q9NZH5 202 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 GRIN2DO15399 1336 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 CNTN1Q12860 1018 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 TAF5Q15542 800 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 MARC1Q5VT66 337 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 FBXO39Q8N4B4 442 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 MARK4Q96L34 752 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 SNTG2Q9NY99 539 aa16.77■□□□□ 0.28
SH3RF1-201ENST00000284637 E5RJQ4 531 aa16.77■□□□□ 0.27
SH3RF1-201ENST00000284637 IDH3BO43837 385 aa16.77■□□□□ 0.27
SH3RF1-201ENST00000284637 ATG7O95352 703 aa16.77■□□□□ 0.27
SH3RF1-201ENST00000284637 ITGB6P18564 788 aa16.77■□□□□ 0.27
SH3RF1-201ENST00000284637 HALP42357 657 aa16.77■□□□□ 0.27
SH3RF1-201ENST00000284637 CCNG1P51959 295 aa16.77■□□□□ 0.27
SH3RF1-201ENST00000284637 YWHAZP63104 245 aaKnown RBP16.77■□□□□ 0.27
SH3RF1-201ENST00000284637 SAMD4BQ5PRF9 694 aaKnown RBP16.77■□□□□ 0.27
SH3RF1-201ENST00000284637 ZFAND2BQ8WV99 257 aa16.77■□□□□ 0.27
SH3RF1-201ENST00000284637 ART4Q93070 314 aa16.77■□□□□ 0.27
SH3RF1-201ENST00000284637 XPNPEP3Q9NQH7 507 aa16.77■□□□□ 0.27
SH3RF1-201ENST00000284637 RGS18Q9NS28 235 aa16.77■□□□□ 0.27
SH3RF1-201ENST00000284637 SLC12A8A0AV02 714 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 FAM25AB3EWG3 89 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 FAM25CB3EWG5 89 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 FAM25GB3EWG6 89 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 CCNT2O60583 730 aaKnown RBP16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 BST1Q10588 318 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 WASHC5Q12768 1159 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 MAMLD1Q13495 774 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 RORBQ92753 470 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 DNAJC19Q96DA6 116 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 YIPF2Q9BWQ6 316 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 POMKQ9H5K3 350 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 ALOX5P09917 674 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 FLT3P36888 993 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 NAGLUP54802 743 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 TMEM26Q6ZUK4 368 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 OSMRQ99650 979 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 UBXN6Q9BZV1 441 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 REXO4Q9GZR2 422 aaKnown RBP16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 C15orf38-AP3S2A0A0A6YYH1 394 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 C17orf102A2RUQ5 167 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 ITGALP20701 1170 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 EIF4BP23588 611 aaKnown RBP16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 RFX3P48380 749 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 RPL14P50914 215 aaKnown RBP16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 RPS7P62081 194 aaKnown RBP16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 NCF4Q15080 339 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms