RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 SPATA31D4Q6ZUB0 917 aa18.63■□□□□ 0.57
VIM-201ENST00000224237 TMC7Q7Z402 723 aa18.63■□□□□ 0.57
VIM-201ENST00000224237 ITIH5Q86UX2 942 aa18.63■□□□□ 0.57
VIM-201ENST00000224237 CCDC13Q8IYE1 715 aa18.63■□□□□ 0.57
VIM-201ENST00000224237 ZNF683Q8IZ20 524 aa18.63■□□□□ 0.57
VIM-201ENST00000224237 ZNF567Q8N184 647 aa18.63■□□□□ 0.57
VIM-201ENST00000224237 MCUQ8NE86 351 aa18.63■□□□□ 0.57
VIM-201ENST00000224237 CELF6Q96J87 481 aaKnown RBP18.63■□□□□ 0.57
VIM-201ENST00000224237 SERPINB12Q96P63 405 aa18.63■□□□□ 0.57
VIM-201ENST00000224237 VAT1Q99536 393 aa18.63■□□□□ 0.57
VIM-201ENST00000224237 LBHD1Q9BQE6 289 aaPredicted RBP18.63■□□□□ 0.57
VIM-201ENST00000224237 HTATIP2Q9BUP3 242 aa18.63■□□□□ 0.57
VIM-201ENST00000224237 ZYG11BQ9C0D3 744 aa18.63■□□□□ 0.57
VIM-201ENST00000224237 ADAM21Q9UKJ8 722 aa18.63■□□□□ 0.57
VIM-201ENST00000224237 LZTS1Q9Y250 596 aa18.63■□□□□ 0.57
VIM-201ENST00000224237 CLUHO75153 1309 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 IGLV3-10A0A075B6K4 115 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 KCNK1O00180 336 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 TGM5O43548 720 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 CTNNB1P35222 781 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 C6orf118Q5T5N4 469 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 DNAJB7Q7Z6W7 309 aaPredicted RBP18.62■□□□□ 0.57
VIM-201ENST00000224237 ARHGAP12Q8IWW6 846 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 PYROXD1Q8WU10 500 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 DPF3Q92784 378 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 LRRC4CQ9HCJ2 640 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 MPP6Q9NZW5 540 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 KLHL8Q9P2G9 620 aaPredicted RBP18.62■□□□□ 0.57
VIM-201ENST00000224237 IGSF9Q9P2J2 1179 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 RWDD3Q9Y3V2 267 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 CHD9Q3L8U1 2897 aa18.62■□□□□ 0.57
VIM-201ENST00000224237 A0A087WUV0 522 aaPredicted RBP18.61■□□□□ 0.57
VIM-201ENST00000224237 RASGRF2O14827 1237 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 COCHO43405 550 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 CXCL14O95715 111 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 ADH1AP07327 375 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 IVLP07476 585 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 RHOQP17081 205 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 PTPN3P26045 913 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 BMPR1AP36894 532 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 CDK16Q00536 496 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 PARP6Q2NL67 630 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 MSS51Q4VC12 460 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 C9orf50Q5SZB4 431 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 SYCP2LQ5T4T6 812 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 FAM109BQ6ICB4 259 aaPredicted RBP18.61■□□□□ 0.57
VIM-201ENST00000224237 ZNF771Q7L3S4 317 aaPredicted RBP18.61■□□□□ 0.57
VIM-201ENST00000224237 NLRP14Q86W24 1093 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 ATPAF2Q8N5M1 289 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 PGM2Q96G03 612 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 TSGA13Q96PP4 275 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 CCDC77Q9BR77 488 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 EIF2B3Q9NR50 452 aaKnown RBP18.61■□□□□ 0.57
VIM-201ENST00000224237 PSD3Q9NYI0 1048 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 IRAK3Q9Y616 596 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 LAMA3Q16787 3333 aa18.61■□□□□ 0.57
VIM-201ENST00000224237 GRXCR1A8MXD5 290 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 DFFAO00273 331 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 TCEA3O75764 348 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 CCNCP24863 283 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 GYS2P54840 703 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 SARNPP82979 210 aaKnown RBP18.6■□□□□ 0.57
VIM-201ENST00000224237 STAT4Q14765 748 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 BBS9Q3SYG4 887 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 HP1BP3Q5SSJ5 553 aaPredicted RBP18.6■□□□□ 0.57
VIM-201ENST00000224237 RAP1GAP2Q684P5 730 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 PID1Q7Z2X4 250 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 LRRC49Q8IUZ0 686 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 SH2D3CQ8N5H7 860 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 ATP11CQ8NB49 1132 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 EPS8L3Q8TE67 593 aaKnown RBP18.6■□□□□ 0.57
VIM-201ENST00000224237 PLD4Q96BZ4 506 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 PRMT1Q99873 361 aaKnown RBP18.6■□□□□ 0.57
VIM-201ENST00000224237 TCF25Q9BQ70 676 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 C17orf80Q9BSJ5 609 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 CEP41Q9BYV8 373 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 TMEM248Q9NWD8 314 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 BCCIPQ9P287 314 aaKnown RBP eCLIP18.6■□□□□ 0.57
VIM-201ENST00000224237 TRHDEQ9UKU6 1024 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 ASB3Q9Y575 518 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.6■□□□□ 0.57
VIM-201ENST00000224237 DOCK4Q8N1I0 1966 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 NUP205Q92621 2012 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 TLDC2A0PJX2 215 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 BANF1O75531 89 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 OAS1P00973 400 aaKnown RBP18.6■□□□□ 0.57
VIM-201ENST00000224237 TSHRP16473 764 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 DNAJB1P25685 340 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 PHBP35232 272 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 LMAN1P49257 510 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 HARS2P49590 506 aaKnown RBP18.6■□□□□ 0.57
VIM-201ENST00000224237 KCNQ1P51787 676 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 ERVFC1P60507 584 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 CCDC38Q502W7 563 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 AFMIDQ63HM1 303 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 FBXL22Q6P050 247 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 CHSY1Q86X52 802 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 ANKMY2Q8IV38 441 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 FBXO36Q8NEA4 188 aa18.6■□□□□ 0.57
VIM-201ENST00000224237 DEPDC1BQ8WUY9 529 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms