RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 LMNB2Q03252 620 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 DLX2Q07687 328 aaPredicted RBP19.14■□□□□ 0.65
SSBP4-212ENST00000601919 ADCY2Q08462 1091 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 C2orf54Q08AI8 447 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 PAFAH1B3Q15102 231 aaKnown RBP19.14■□□□□ 0.65
SSBP4-212ENST00000601919 C5orf22Q49AR2 442 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 NCBP2-AS2Q69YL0 99 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 DRICH1Q6PGQ1 229 aaPredicted RBP19.14■□□□□ 0.65
SSBP4-212ENST00000601919 C1orf228Q6PIY5 440 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 FAM217AQ8IXS0 508 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 ZNF683Q8IZ20 524 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 CPXM2Q8N436 756 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 MMGT1Q8N4V1 131 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 CCDC26Q8TAB7 109 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 ACTL9Q8TC94 416 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 E2F7Q96AV8 911 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 OTUB2Q96DC9 234 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 SMG9Q9H0W8 520 aaKnown RBP19.14■□□□□ 0.65
SSBP4-212ENST00000601919 HEY1Q9Y5J3 304 aa19.14■□□□□ 0.65
SSBP4-212ENST00000601919 GOLGA6L7A0A1B0GV03 622 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 NCAM2O15394 837 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 PRAMEF12O95522 483 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 OTUD4Q01804 1114 aaKnown RBP19.13■□□□□ 0.65
SSBP4-212ENST00000601919 USP4Q13107 963 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 ZNF77Q15935 545 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 KLHL7Q8IXQ5 586 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 RTL3Q8N8U3 475 aaKnown RBP19.13■□□□□ 0.65
SSBP4-212ENST00000601919 HJURPQ8NCD3 748 aaPredicted RBP19.13■□□□□ 0.65
SSBP4-212ENST00000601919 SMRP1Q8NCR6 262 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 GRK7Q8WTQ7 553 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 C1orf54Q8WWF1 131 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 WBP2Q969T9 261 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 HAUS1Q96CS2 278 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 ASB16Q96NS5 453 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 CDX2Q99626 313 aaPredicted RBP19.13■□□□□ 0.65
SSBP4-212ENST00000601919 TRPV4Q9HBA0 871 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 OBP2AQ9NY56 170 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 CCL26Q9Y258 94 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 NR2E1Q9Y466 385 aa19.13■□□□□ 0.65
SSBP4-212ENST00000601919 LIASO43766 372 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 MX2P20592 715 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 SLC6A4P31645 630 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 MAPKAPK2P49137 400 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 CDH4P55283 916 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 EIF3EP60228 445 aaKnown RBP19.12■□□□□ 0.65
SSBP4-212ENST00000601919 XRCC4Q13426 336 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 BYSLQ13895 437 aaKnown RBP19.12■□□□□ 0.65
SSBP4-212ENST00000601919 PDK1Q15118 436 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 NOMO1Q15155 1222 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 GLE1Q53GS7 698 aaKnown RBP19.12■□□□□ 0.65
SSBP4-212ENST00000601919 RFWD3Q6PCD5 774 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 CHST9Q7L1S5 443 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 MAATS1Q7Z4T9 603 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 CCDC105Q8IYK2 499 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 ZDHHC14Q8IZN3 488 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 MYLIPQ8WY64 445 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 NKD2Q969F2 451 aaPredicted RBP19.12■□□□□ 0.65
SSBP4-212ENST00000601919 IGSF8Q969P0 613 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 KRT12Q99456 494 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 TMEM248Q9NWD8 314 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 NEU3Q9UQ49 428 aa19.12■□□□□ 0.65
SSBP4-212ENST00000601919 R3HDM2Q9Y2K5 976 aaKnown RBP19.12■□□□□ 0.65
SSBP4-212ENST00000601919 DENND4AQ7Z401 1863 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 HACD1B0YJ81 288 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 PPP1R12AO14974 1030 aaPredicted RBP19.11■□□□□ 0.65
SSBP4-212ENST00000601919 CLDN11O75508 207 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 CYBBP04839 570 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 FOSL2P15408 326 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 PECAM1P16284 738 aaPredicted RBP19.11■□□□□ 0.65
SSBP4-212ENST00000601919 COILP38432 576 aaPredicted RBP19.11■□□□□ 0.65
SSBP4-212ENST00000601919 VCPP55072 806 aaKnown RBP19.11■□□□□ 0.65
SSBP4-212ENST00000601919 SNX1Q13596 522 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 DHX34Q14147 1143 aaKnown RBP19.11■□□□□ 0.65
SSBP4-212ENST00000601919 FAM78AQ5JUQ0 283 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 CCDC137Q6PK04 289 aaKnown RBP19.11■□□□□ 0.65
SSBP4-212ENST00000601919 NLRP14Q86W24 1093 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 CCDC117Q8IWD4 279 aaPredicted RBP19.11■□□□□ 0.65
SSBP4-212ENST00000601919 BBS7Q8IWZ6 715 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 TDRD5Q8NAT2 981 aaKnown RBP19.11■□□□□ 0.65
SSBP4-212ENST00000601919 ATL2Q8NHH9 583 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 TMA16Q96EY4 203 aaKnown RBP19.11■□□□□ 0.65
SSBP4-212ENST00000601919 FERMT1Q9BQL6 677 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 BRD8Q9H0E9 1235 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 DDX47Q9H0S4 455 aaKnown RBP19.11■□□□□ 0.65
SSBP4-212ENST00000601919 ZFP14Q9HCL3 533 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 ETNK2Q9NVF9 386 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 MPP6Q9NZW5 540 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 PCYOX1Q9UHG3 505 aa19.11■□□□□ 0.65
SSBP4-212ENST00000601919 DRG1Q9Y295 367 aaKnown RBP19.11■□□□□ 0.65
SSBP4-212ENST00000601919 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.1■□□□□ 0.65
SSBP4-212ENST00000601919 A0A1B0GVM2 712 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 TCAF2A6NFQ2 919 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 H7C0C1 242 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 MFSD11O43934 449 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 GAS8O95995 478 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 ITGAVP06756 1048 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 GBP2P32456 591 aaPredicted RBP19.1■□□□□ 0.65
SSBP4-212ENST00000601919 ATP5OP48047 213 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 NDST2P52849 883 aa19.1■□□□□ 0.65
SSBP4-212ENST00000601919 GBE1Q04446 702 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms