RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 C6orf106Q9H6K1 298 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 ABCB8Q9NUT2 735 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 GGA2Q9UJY4 613 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 LHX6Q9UPM6 363 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 CKAP5Q14008 2032 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 FLRT2O43155 660 aa18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 MSI1O43347 362 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 DKK1O94907 266 aa18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 DLDP09622 509 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 ACSL1P33121 698 aa18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 USP8P40818 1118 aa18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 DAOAP59103 153 aa18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 AOPEPQ8N6M6 819 aa18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 ZNF557Q8N988 423 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 SLC35F5Q8WV83 523 aa18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 IRGQQ8WZA9 623 aa18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 CDC6Q99741 560 aa18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 PRSS16Q9NQE7 514 aa18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 LIMA1Q9UHB6 759 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 DNAJC12Q9UKB3 198 aa18.22■□□□□ 0.51
SHKBP1-203ENST00000594298 A0A1B0GVT2 93 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 BECN2A8MW95 431 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 IRAK2O43187 625 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 ATP5BP06576 529 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 GRIA4P48058 902 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 CSNK1EP49674 416 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 ZNF165P49910 485 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 SGSHP51688 502 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 COPB1P53618 953 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 RPS14P62263 151 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 TEAD4Q15561 434 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 PIK3R6Q5UE93 754 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 NUGGCQ68CJ6 796 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 MBLAC2Q68D91 279 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 GJB7Q6PEY0 223 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 UNC45BQ8IWX7 931 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 TFAP2BQ92481 460 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 SHC3Q92529 594 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 GOLGA1Q92805 767 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 AZIN2Q96A70 460 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 BTBD1Q9H0C5 482 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 TOR4AQ9NXH8 423 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 SLCO1B1Q9Y6L6 691 aa18.21■□□□□ 0.51
SHKBP1-203ENST00000594298 MUC22E2RYF6 1773 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 SYCE3A1L190 88 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 LRRC10BA6NIK2 292 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 GABBR2O75899 941 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 SEMA4FO95754 770 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 DNTTP04053 509 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 LCP1P13796 627 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 HOXB3P14651 431 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 BRD2P25440 801 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 SLC11A2P49281 568 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 BPIFB4P59827 614 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 TPM4P67936 248 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 PTK2Q05397 1052 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 KCNMA1Q12791 1236 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 NCAPHQ15003 741 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 SUZ12Q15022 739 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 MEA1Q16626 185 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 KIF19Q2TAC6 998 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 FAM133BQ5BKY9 247 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 KLHDC7AQ5VTJ3 777 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 ZNF366Q8N895 744 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 SNX19Q92543 992 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 BIRC7Q96CA5 298 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 LMLNQ96KR4 655 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 SGK2Q9HBY8 427 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 TM9SF3Q9HD45 589 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 SIX2Q9NPC8 291 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 PLCB1Q9NQ66 1216 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 SUN2Q9UH99 717 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 DAAM1Q9Y4D1 1078 aa18.2■□□□□ 0.5
SHKBP1-203ENST00000594298 M0QYV0 167 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 ZNF18P17022 549 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 POLR2EP19388 210 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 CD27P26842 260 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 GNA15P30679 374 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 CD70P32970 193 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 TTC31Q49AM3 519 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 PMF1Q6P1K2 205 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 TMPRSS7Q7RTY8 843 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 WFDC5Q8TCV5 224 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 RHBDD1Q8TEB9 315 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 IGSF8Q969P0 613 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 TTC17Q96AE7 1141 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 HSFY1Q96LI6 401 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 CCDC86Q9H6F5 360 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 SCML1Q9UN30 329 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 ANKRD6Q9Y2G4 727 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 GPSM3Q9Y4H4 160 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 SNX11Q9Y5W9 270 aa18.19■□□□□ 0.5
SHKBP1-203ENST00000594298 THAP12O43422 761 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 PCDHGA12O60330 932 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 ACSL4O60488 711 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 TBL1XO60907 577 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 SLC6A4P31645 630 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 APBA1Q02410 837 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms