RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 RPGRQ92834 1020 aaKnown RBP6.32□□□□□ -1.4
SMAD4-203ENST00000585448 TRIM63Q969Q1 353 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 NAP1L4Q99733 375 aaKnown RBP6.32□□□□□ -1.4
SMAD4-203ENST00000585448 COQ7Q99807 217 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 ECSITQ9BQ95 431 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 PSD2Q9BQI7 771 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 BTBD2Q9BX70 525 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 AGXT2Q9BYV1 514 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 CDH19Q9H159 772 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 SMARCAD1Q9H4L7 1026 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 EPB41L5Q9HCM4 733 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 UBN1Q9NPG3 1134 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 SAR1AQ9NR31 198 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 FARSBQ9NSD9 589 aaKnown RBP6.32□□□□□ -1.4
SMAD4-203ENST00000585448 C9orf78Q9NZ63 289 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-203ENST00000585448 STMN3Q9NZ72 180 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 CLIC5Q9NZA1 410 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 EMC3Q9P0I2 261 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 HMG20BQ9P0W2 317 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 ARHGAP28Q9P2N2 729 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 ZFP69BQ9UJL9 534 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 SPEF1Q9Y4P9 236 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 KNDC1Q76NI1 1749 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 AKAP12Q02952 1782 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 ADGRB3O60242 1522 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 LRRIQ1Q96JM4 1722 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 A2MP01023 1474 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 A0A087WWV3 80 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 OR5K4A6NMS3 321 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 F8W8V4 182 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 FOXN3O00409 490 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-203ENST00000585448 KPNA4O00629 521 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-203ENST00000585448 KCNK3O14649 394 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 MUSKO15146 869 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 MAPK13O15264 365 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 ADCY6O43306 1168 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 EXTL3O43909 919 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 PDE8AO60658 829 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 GAS7O60861 476 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 SRGAP2O75044 1071 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 ZWINTO95229 277 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 IL18BPO95998 194 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 MYBP10242 640 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 RPS6KB1P23443 525 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 PKLRP30613 574 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 IL13P35225 146 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 TRIM23P36406 574 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 ADCY8P40145 1251 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 STAT3P40763 770 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 GPD2P43304 727 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 SYKP43405 635 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 IFNAR2P48551 515 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 CARSP49589 748 aaKnown RBP6.31□□□□□ -1.4
SMAD4-203ENST00000585448 CHN2P52757 468 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 MLLT6P55198 1093 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-203ENST00000585448 DHCR24Q15392 516 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 C21orf62-AS1Q17RA5 79 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 KRT71Q3SY84 523 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 ZC2HC1CQ53FD0 456 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-203ENST00000585448 FBLN7Q53RD9 439 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 C6orf10Q5SRN2 563 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 ZBTB41Q5SVQ8 909 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 SLX4IPQ5VYV7 408 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 METTL2BQ6P1Q9 378 aaKnown RBP6.31□□□□□ -1.4
SMAD4-203ENST00000585448 CNNM4Q6P4Q7 775 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 BTNL9Q6UXG8 535 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 ZNF600Q6ZNG1 722 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 MCM10Q7L590 875 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 GPR141Q7Z602 305 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 STK32CQ86UX6 486 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 VSIG1Q86XK7 387 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 NATD1Q8N6N6 113 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 USP38Q8NB14 1042 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 PCYOX1LQ8NBM8 494 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 LINC00301Q8NCQ3 95 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 SUPT20HQ8NEM7 779 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 APPL2Q8NEU8 664 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 RAPGEF4Q8WZA2 1011 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 HERVK_113Q902F9 699 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 E2F7Q96AV8 911 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 FOXRED1Q96CU9 486 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-203ENST00000585448 METTL2AQ96IZ6 378 aaKnown RBP6.31□□□□□ -1.4
SMAD4-203ENST00000585448 DNAJC1Q96KC8 554 aaKnown RBP6.31□□□□□ -1.4
SMAD4-203ENST00000585448 C16orf92Q96LL3 132 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 LRGUKQ96M69 825 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 VPS35Q96QK1 796 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 TSG101Q99816 390 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 CCDC77Q9BR77 488 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 TMEM109Q9BVC6 243 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 RBM38Q9H0Z9 239 aaKnown RBP6.31□□□□□ -1.4
SMAD4-203ENST00000585448 Q9H521 79 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 DENND2DQ9H6A0 471 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-203ENST00000585448 SH2D4AQ9H788 454 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 IFT22Q9H7X7 185 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 MARCH7Q9H992 704 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 FANCEQ9HB96 536 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 CD93Q9NPY3 652 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 KCTD5Q9NXV2 234 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 EPS15L1Q9UBC2 864 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 ADD3Q9UEY8 706 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms