RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 ENPP2Q13822 863 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 PUM1Q14671 1186 aaKnown RBP eCLIP17.19■□□□□ 0.34
SREBF1-219ENST00000580540 RABGAP1LQ5R372 815 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 SLC36A4Q6YBV0 504 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 KIAA0907Q7Z7F0 614 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-219ENST00000580540 TMPRSS6Q8IU80 811 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 SIPA1Q96FS4 1042 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 RPRD1AQ96P16 312 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-219ENST00000580540 TBCBQ99426 244 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 NPY6RQ99463 290 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 C11orf70Q9BRQ4 267 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 MKRN2Q9H000 416 aaKnown RBP17.19■□□□□ 0.34
SREBF1-219ENST00000580540 WDCPQ9H6R7 721 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 CD93Q9NPY3 652 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 VPS45Q9NRW7 570 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 PIGVQ9NUD9 493 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 KIAA1522Q9P206 1035 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-219ENST00000580540 VANGL2Q9ULK5 521 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 FOXD2O60548 495 aaPredicted RBP17.18■□□□□ 0.34
SREBF1-219ENST00000580540 NDUFS2O75306 463 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 PAGE1O75459 146 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 MOCS3O95396 460 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 ADCY5O95622 1261 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 CYP1A1P04798 512 aaPredicted RBP17.18■□□□□ 0.34
SREBF1-219ENST00000580540 FLT3P36888 993 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 SCNN1AP37088 669 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 PTGER3P43115 390 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 ST8SIA6P61647 398 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 AUHQ13825 339 aaKnown RBP17.18■□□□□ 0.34
SREBF1-219ENST00000580540 PTPRNQ16849 979 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 PLA2G2CQ5R387 149 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 OTUD1Q5VV17 481 aaPredicted RBP17.18■□□□□ 0.34
SREBF1-219ENST00000580540 RNF43Q68DV7 783 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 TCEAL6Q6IPX3 200 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 FBXL22Q6P050 247 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 TRIM72Q6ZMU5 477 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 PRCCQ92733 491 aaPredicted RBP17.18■□□□□ 0.34
SREBF1-219ENST00000580540 TCEAL3Q969E4 200 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 PCDHB18PQ96TA0 734 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 PRMT1Q99873 361 aaKnown RBP17.18■□□□□ 0.34
SREBF1-219ENST00000580540 ADAM33Q9BZ11 813 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 TKTL2Q9H0I9 626 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 RTN4Q9NQC3 1192 aaKnown RBP17.18■□□□□ 0.34
SREBF1-219ENST00000580540 METTL5Q9NRN9 209 aaKnown RBP17.18■□□□□ 0.34
SREBF1-219ENST00000580540 HS3ST4Q9Y661 456 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 CEP250Q9BV73 2442 aa17.18■□□□□ 0.34
SREBF1-219ENST00000580540 IGHV1OR15-9A0A0B4J2B8 117 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 AP5Z1O43299 807 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 F9P00740 461 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 SERPINC1P01008 464 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 ACADMP11310 421 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 PTMSP20962 102 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 SDHBP21912 280 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 NSFP46459 744 aaKnown RBP17.17■□□□□ 0.34
SREBF1-219ENST00000580540 ATXN1P54253 815 aaKnown RBP17.17■□□□□ 0.34
SREBF1-219ENST00000580540 CENPCQ03188 943 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 SLC25A52Q3SY17 297 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 PITRM1Q5JRX3 1037 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 LYSMD4Q5XG99 296 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 C14orf80Q86SX3 495 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 CCAR2Q8N163 923 aaKnown RBP17.17■□□□□ 0.34
SREBF1-219ENST00000580540 EMC1Q8N766 993 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 OR2T3Q8NH03 318 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 IGSF8Q969P0 613 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 LMLNQ96KR4 655 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 CFAP57Q96MR6 1250 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 FUCA2Q9BTY2 467 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 INTS6Q9UL03 887 aaKnown RBP17.17■□□□□ 0.34
SREBF1-219ENST00000580540 SNX10Q9Y5X0 201 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 GON4LQ3T8J9 2241 aa17.17■□□□□ 0.34
SREBF1-219ENST00000580540 GJB6O95452 261 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 ASLP04424 464 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 CCDC172P0C7W6 258 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 PDGFRAP16234 1089 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 MMP8P22894 467 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 CTSOP43234 321 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-219ENST00000580540 CXCR3P49682 368 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 TPM4P67936 248 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 ATP11AP98196 1134 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 MTA1Q13330 715 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 IQCB1Q15051 598 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 CLEC16AQ2KHT3 1053 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 BRMS1LQ5PSV4 323 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 TTC39BQ5VTQ0 682 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-219ENST00000580540 RNF219Q5W0B1 726 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-219ENST00000580540 DGLUCYQ7Z3D6 616 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 APCDD1Q8J025 514 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 NETO1Q8TDF5 533 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 TTC17Q96AE7 1141 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 NAP1L5Q96NT1 182 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-219ENST00000580540 AGPAT1Q99943 283 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 TMEM245Q9H330 911 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 MTG2Q9H4K7 406 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 CBX8Q9HC52 389 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 RXFP3Q9NSD7 469 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 DLL3Q9NYJ7 618 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 ADAM22Q9P0K1 906 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 SUN2Q9UH99 717 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 TMEM59LQ9UK28 342 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 ERVW-1Q9UQF0 538 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms