RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 OLFML1Q6UWY5 402 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 SLC26A9Q7LBE3 791 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 ARCQ7LC44 396 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 TRMT11Q7Z4G4 463 aaKnown RBP16.26■□□□□ 0.19
USB1-208ENST00000563207 C11orf74Q86VG3 221 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 OR2I1PQ8NGU4 316 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 SLC30A5Q8TAD4 765 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 FAM149B1Q96BN6 582 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 PIWIL1Q96J94 861 aaKnown RBP16.26■□□□□ 0.19
USB1-208ENST00000563207 SPACA7Q96KW9 195 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 MRGPRX1Q96LB2 322 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 ADAM22Q9P0K1 906 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 PILRBQ9UKJ0 227 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 STON1Q9Y6Q2 735 aa16.26■□□□□ 0.19
USB1-208ENST00000563207 KMT2BQ9UMN6 2715 aaPredicted RBP16.26■□□□□ 0.19
USB1-208ENST00000563207 PI4KAP42356 2102 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 RTN2O75298 545 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 TOP3BO95985 862 aaKnown RBP16.25■□□□□ 0.19
USB1-208ENST00000563207 PMLP29590 882 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 FUT11Q495W5 492 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 PREPLQ4J6C6 727 aaPredicted RBP16.25■□□□□ 0.19
USB1-208ENST00000563207 SH3PXD2AQ5TCZ1 1133 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 LYSMD4Q5XG99 296 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 MSANTD2Q6P1R3 559 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 NUDT18Q6ZVK8 323 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 FAM183BPQ6ZVS7 135 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 XYLT1Q86Y38 959 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 SYT12Q8IV01 421 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 TC2NQ8N9U0 490 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 PANX2Q96RD6 677 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 MKRN2Q9H000 416 aaKnown RBP16.25■□□□□ 0.19
USB1-208ENST00000563207 TMEM9BQ9NQ34 198 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 RRN3Q9NYV6 651 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 ARHGAP20Q9P2F6 1191 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 ADAMTS1Q9UHI8 967 aa16.25■□□□□ 0.19
USB1-208ENST00000563207 PCDH15Q96QU1 1955 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 GOLGA6L7A0A1B0GV03 622 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 DDX3XO00571 662 aaKnown RBP eCLIP16.24■□□□□ 0.192e-15■■■■■ 27.4
USB1-208ENST00000563207 CAPN9O14815 690 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 NCAM1P13591 858 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 ENGP17813 658 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 SPINK2P20155 84 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 PRKCHP24723 683 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 MAOBP27338 520 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 NOVA1P51513 510 aaKnown RBP16.24■□□□□ 0.19
USB1-208ENST00000563207 PTP4A2Q12974 167 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 TRIP4Q15650 581 aaPredicted RBP16.24■□□□□ 0.19
USB1-208ENST00000563207 SDE2Q6IQ49 451 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 MON1BQ7L1V2 547 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 CACUL1Q86Y37 369 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 DDI1Q8WTU0 396 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 TRIM11Q96F44 468 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.24■□□□□ 0.19
USB1-208ENST00000563207 ISCUQ9H1K1 167 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 TJP2Q9UDY2 1190 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 SLC27A6Q9Y2P4 619 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 HBS1LQ9Y450 684 aaKnown RBP16.24■□□□□ 0.19
USB1-208ENST00000563207 CHD8Q9HCK8 2581 aa16.24■□□□□ 0.19
USB1-208ENST00000563207 CFIP05156 583 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 FYNP06241 537 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 MYBL1P10243 752 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 HOXD9P28356 352 aaPredicted RBP16.23■□□□□ 0.19
USB1-208ENST00000563207 NOS2P35228 1153 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 CHKAP35790 457 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 ZNF33AQ06730 810 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 NNTQ13423 1086 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 SLC18A3Q16572 532 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 FAM102AQ5T9C2 384 aaPredicted RBP16.23■□□□□ 0.19
USB1-208ENST00000563207 KIAA1324Q6UXG2 1013 aaKnown RBP16.23■□□□□ 0.19
USB1-208ENST00000563207 MMS22LQ6ZRQ5 1243 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 FAM217AQ8IXS0 508 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 MCOLN2Q8IZK6 566 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 CPXM2Q8N436 756 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 ZNF366Q8N895 744 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 DEFB124Q8NES8 71 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 WFDC5Q8TCV5 224 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 MYEOVQ96EZ4 313 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 CCDC42Q96M95 316 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 HSPA12BQ96MM6 686 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 SLC2A13Q96QE2 648 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 C11orf70Q9BRQ4 267 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 DCLK3Q9C098 648 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 DEF6Q9H4E7 631 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 THAP10Q9P2Z0 257 aaPredicted RBP16.23■□□□□ 0.19
USB1-208ENST00000563207 EVLQ9UI08 416 aaPredicted RBP16.23■□□□□ 0.19
USB1-208ENST00000563207 ZNF510Q9Y2H8 683 aa16.23■□□□□ 0.19
USB1-208ENST00000563207 MUC22E2RYF6 1773 aaPredicted RBP16.23■□□□□ 0.19
USB1-208ENST00000563207 ASCC3Q8N3C0 2202 aaKnown RBP16.22■□□□□ 0.19
USB1-208ENST00000563207 GFRA2O00451 464 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 DAB1O75553 588 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 FTLP02792 175 aaPredicted RBP16.22■□□□□ 0.19
USB1-208ENST00000563207 PLEKP08567 350 aaPredicted RBP16.22■□□□□ 0.19
USB1-208ENST00000563207 HLA-EP13747 358 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 EIF4A3P38919 411 aaKnown RBP16.22■□□□□ 0.19
USB1-208ENST00000563207 ENPP2Q13822 863 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 BYSLQ13895 437 aaKnown RBP16.22■□□□□ 0.19
USB1-208ENST00000563207 ZNF234Q14588 700 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 ASTE1Q2TB18 679 aaPredicted RBP16.22■□□□□ 0.19
USB1-208ENST00000563207 PEAR1Q5VY43 1037 aaPredicted RBP16.22■□□□□ 0.19
USB1-208ENST00000563207 ALKBH5Q6P6C2 394 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms