RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 TYRP14679 529 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 MSNP26038 577 aaKnown RBP11.96□□□□□ -0.49
YBX3-213ENST00000542641 CTNNA2P26232 953 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 EPHB2P29323 1055 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 CTNNA1P35221 906 aaKnown RBP11.96□□□□□ -0.49
YBX3-213ENST00000542641 SGSHP51688 502 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 CDH6P55285 790 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 TPI1P60174 286 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 PDK2Q15119 407 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 ZNF569Q5MCW4 686 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 MPP7Q5T2T1 576 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 MANEALQ5VSG8 457 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 TTC39BQ5VTQ0 682 aaPredicted RBP11.96□□□□□ -0.49
YBX3-213ENST00000542641 FYB2Q5VWT5 728 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 CIR1Q86X95 450 aaPredicted RBP11.96□□□□□ -0.49
YBX3-213ENST00000542641 MAP7D3Q8IWC1 876 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 CCDC117Q8IWD4 279 aaPredicted RBP11.96□□□□□ -0.49
YBX3-213ENST00000542641 ZNF683Q8IZ20 524 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 UBL4BQ8N7F7 174 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 NAT16Q8N8M0 369 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 UBE2Q2Q8WVN8 375 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 KRT35Q92764 455 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 DNASE1L2Q92874 299 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 TBC1D31Q96DN5 1066 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 PRICKLE1Q96MT3 831 aaPredicted RBP11.96□□□□□ -0.49
YBX3-213ENST00000542641 CALN1Q9BXU9 219 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 ZYG11BQ9C0D3 744 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 PCDH18Q9HCL0 1135 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 CD320Q9NPF0 282 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 TRPV5Q9NQA5 729 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 SLC2A4RGQ9NR83 387 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 PLK2Q9NYY3 685 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 MARK1Q9P0L2 795 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 STIM2Q9P246 746 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 PPARGC1AQ9UBK2 798 aaKnown RBP11.96□□□□□ -0.49
YBX3-213ENST00000542641 PACSIN2Q9UNF0 486 aaPredicted RBP11.96□□□□□ -0.49
YBX3-213ENST00000542641 DUSP12Q9UNI6 340 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 PCDHA3Q9Y5H8 950 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 IGLV3-10A0A075B6K4 115 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 LRRD1A4D1F6 860 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 PI4K2BG5E9Z4 385 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 H3BRJ5 948 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 EEF2KO00418 725 aaKnown RBP11.95□□□□□ -0.5
YBX3-213ENST00000542641 HOXC11O43248 304 aaPredicted RBP11.95□□□□□ -0.5
YBX3-213ENST00000542641 ZRANB2O95218 330 aaKnown RBP eCLIP11.95□□□□□ -0.5
YBX3-213ENST00000542641 PENKP01210 267 aaPredicted RBP11.95□□□□□ -0.5
YBX3-213ENST00000542641 KRT1P04264 644 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 CD48P09326 243 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 GOT1P17174 413 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 KDELR1P24390 212 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 HTR7P34969 479 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 GJA4P35212 333 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 DEKP35659 375 aaKnown RBP11.95□□□□□ -0.5
YBX3-213ENST00000542641 ARL4AP40617 200 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 MARCKSL1P49006 195 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 IRAK1P51617 712 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 ARSEP51690 589 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 ZNF135P52742 658 aaPredicted RBP11.95□□□□□ -0.5
YBX3-213ENST00000542641 RWDD2BP57060 319 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 AMPD2Q01433 879 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 SEMA3BQ13214 749 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 C5orf22Q49AR2 442 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 ARTNQ5T4W7 220 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 MEI1Q5TIA1 1274 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 RFX8Q6ZV50 586 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 UBALD2Q8IYN6 164 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 KATNAL2Q8IYT4 538 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 RCOR2Q8IZ40 523 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 CARNMT1Q8N4J0 409 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 FAM71BQ8TC56 605 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 RAPGEF5Q92565 580 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 P2RY11Q96G91 374 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 HES6Q96HZ4 224 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 XPO6Q96QU8 1125 aaKnown RBP11.95□□□□□ -0.5
YBX3-213ENST00000542641 UHRF1Q96T88 793 aaPredicted RBP11.95□□□□□ -0.5
YBX3-213ENST00000542641 HEBP1Q9NRV9 189 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 MPP6Q9NZW5 540 aa11.95□□□□□ -0.5
YBX3-213ENST00000542641 CWC15Q9P013 229 aaKnown RBP11.95□□□□□ -0.5
YBX3-213ENST00000542641 TCF20Q9UGU0 1960 aaKnown RBP11.94□□□□□ -0.5
YBX3-213ENST00000542641 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.94□□□□□ -0.5
YBX3-213ENST00000542641 A0A1B0GVM2 712 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 TCAF2A6NFQ2 919 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 H0Y626 953 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 CLDN11O75508 207 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 CNTN5O94779 1100 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 RHOQP17081 205 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 IL4RP24394 825 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 HOXD9P28356 352 aaPredicted RBP11.94□□□□□ -0.5
YBX3-213ENST00000542641 HCAR3P49019 387 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 PEX5P50542 639 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 DNA2P51530 1060 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 CDH4P55283 916 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 GNG11P61952 73 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 MMRN1Q13201 1228 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 ZNF177Q13360 481 aaPredicted RBP11.94□□□□□ -0.5
YBX3-213ENST00000542641 CDH18Q13634 790 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 DPYSL3Q14195 570 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 RPS6KA1Q15418 735 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 SLC44A4Q53GD3 710 aa11.94□□□□□ -0.5
YBX3-213ENST00000542641 ALFQ53S48 1182 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms