RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 CHST9Q7L1S5 443 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 CCDC117Q8IWD4 279 aaPredicted RBP20.06■□□□□ 0.8
DDX55-207ENST00000540763 CCDC185Q8N715 623 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 TMEM105Q8N8V8 129 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 FIBINQ8TAL6 211 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 WFIKKN2Q8TEU8 576 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 EZH1Q92800 747 aaPredicted RBP20.06■□□□□ 0.8
DDX55-207ENST00000540763 MYEOVQ96EZ4 313 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 RPRD1AQ96P16 312 aaPredicted RBP20.06■□□□□ 0.8
DDX55-207ENST00000540763 SIK2Q9H0K1 926 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 PPARGC1AQ9UBK2 798 aaKnown RBP20.06■□□□□ 0.8
DDX55-207ENST00000540763 VANGL2Q9ULK5 521 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 STARD13Q9Y3M8 1113 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 PCDHA13Q9Y5I0 950 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 CHD5Q8TDI0 1954 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 DRGXA6NNA5 263 aa20.05■□□□□ 0.8
DDX55-207ENST00000540763 E9PAM4 449 aa20.05■□□□□ 0.8
DDX55-207ENST00000540763 HTR7P34969 479 aa20.05■□□□□ 0.8
DDX55-207ENST00000540763 HADHBP55084 474 aaKnown RBP20.05■□□□□ 0.8
DDX55-207ENST00000540763 OXCT1P55809 520 aa20.05■□□□□ 0.8
DDX55-207ENST00000540763 TCF15Q12870 199 aa20.05■□□□□ 0.8
DDX55-207ENST00000540763 EIF4HQ15056 248 aaKnown RBP20.05■□□□□ 0.8
DDX55-207ENST00000540763 HSF5Q4G112 596 aaPredicted RBP20.05■□□□□ 0.8
DDX55-207ENST00000540763 MANEALQ5VSG8 457 aa20.05■□□□□ 0.8
DDX55-207ENST00000540763 SCYL2Q6P3W7 929 aa20.05■□□□□ 0.8
DDX55-207ENST00000540763 ANKS1BQ7Z6G8 1248 aa20.05■□□□□ 0.8
DDX55-207ENST00000540763 KIAA0907Q7Z7F0 614 aaPredicted RBP20.05■□□□□ 0.8
DDX55-207ENST00000540763 MFN1Q8IWA4 741 aa20.05■□□□□ 0.8
DDX55-207ENST00000540763 ARFGAP1Q8N6T3 406 aa20.05■□□□□ 0.8
DDX55-207ENST00000540763 ANP32BQ92688 251 aaKnown RBP20.05■□□□□ 0.8
DDX55-207ENST00000540763 OR12D3Q9UGF7 316 aa20.05■□□□□ 0.8
DDX55-207ENST00000540763 FZD10Q9ULW2 581 aa20.05■□□□□ 0.8
DDX55-207ENST00000540763 MUC22E2RYF6 1773 aaPredicted RBP20.05■□□□□ 0.8
DDX55-207ENST00000540763 A0A0A6YYK5 440 aaPredicted RBP20.04■□□□□ 0.8
DDX55-207ENST00000540763 CHURC1-FNTBB4DL54 471 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 K7EQS6 105 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 PRPSAP2O60256 369 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 CLDN11O75508 207 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 DCNP07585 359 aaKnown RBP20.04■□□□□ 0.8
DDX55-207ENST00000540763 L1CAMP32004 1257 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 MAN1A1P33908 653 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 ARHGAP25P42331 645 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 ZNF135P52742 658 aaPredicted RBP20.04■□□□□ 0.8
DDX55-207ENST00000540763 CDH4P55283 916 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 MRPS21P82921 87 aaKnown RBP20.04■□□□□ 0.8
DDX55-207ENST00000540763 MESP2Q0VG99 397 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 SLC12A1Q13621 1099 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 CDH18Q13634 790 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 CCAR2Q8N163 923 aaKnown RBP20.04■□□□□ 0.8
DDX55-207ENST00000540763 TXLNBQ8N3L3 684 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 SLC35G2Q8TBE7 412 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 IGSF8Q969P0 613 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 CALR3Q96L12 384 aaKnown RBP20.04■□□□□ 0.8
DDX55-207ENST00000540763 OSGEPQ9NPF4 335 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 TMPRSS4Q9NRS4 437 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 CLEC4EQ9ULY5 219 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 USP18Q9UMW8 372 aa20.04■□□□□ 0.8
DDX55-207ENST00000540763 MYO18AQ92614 2054 aaKnown RBP20.04■□□□□ 0.8
DDX55-207ENST00000540763 ATG2BQ96BY7 2078 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 TBC1D3BA6NDS4 549 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 NPC1O15118 1278 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 PROSCO94903 275 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 MIPP30301 263 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 HLA-FP30511 346 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 GGCXP38435 758 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 KIR2DL1P43626 348 aaPredicted RBP20.03■□□□□ 0.8
DDX55-207ENST00000540763 KRT83P78385 493 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 DMC1Q14565 340 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 GSE1Q14687 1217 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 ARTNQ5T4W7 220 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 ERMARDQ5T6L9 678 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 CYP4V2Q6ZWL3 525 aaPredicted RBP20.03■□□□□ 0.8
DDX55-207ENST00000540763 C14orf80Q86SX3 495 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 AHI1Q8N157 1196 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 CFAP52Q8N1V2 620 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 SPEM1Q8N4L4 309 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 ACDQ96AP0 544 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 LMLNQ96KR4 655 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 ZYG11BQ9C0D3 744 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 RBM12Q9NTZ6 932 aaKnown RBP20.03■□□□□ 0.8
DDX55-207ENST00000540763 STIM2Q9P246 746 aa20.03■□□□□ 0.8
DDX55-207ENST00000540763 BTNL10A8MVZ5 291 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 H0Y626 953 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 TRIM24O15164 1050 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 ARHGAP6O43182 974 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 TIMM44O43615 452 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 ATG13O75143 517 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 RNF40O75150 1001 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 CHRM1P11229 460 aaPredicted RBP20.02■□□□□ 0.8
DDX55-207ENST00000540763 PABPC1P11940 636 aaKnown RBP20.02■□□□□ 0.8
DDX55-207ENST00000540763 HOXC13P31276 330 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 SEMA3BQ13214 749 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 BOLA3Q53S33 107 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 TRMT11Q7Z4G4 463 aaKnown RBP20.02■□□□□ 0.8
DDX55-207ENST00000540763 CARNMT1Q8N4J0 409 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 DTWD2Q8NBA8 298 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 WFDC5Q8TCV5 224 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 USP33Q8TEY7 942 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 TEKT4Q8WW24 435 aa20.02■□□□□ 0.8
DDX55-207ENST00000540763 TBC1D31Q96DN5 1066 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms