RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 FSCBQ5H9T9 825 aa17.78■□□□□ 0.44
SFSWAP-205ENST00000537164 SERPINA13PQ6UXR4 307 aa17.78■□□□□ 0.44
SFSWAP-205ENST00000537164 SLC36A4Q6YBV0 504 aa17.78■□□□□ 0.44
SFSWAP-205ENST00000537164 CFAP52Q8N1V2 620 aa17.78■□□□□ 0.44
SFSWAP-205ENST00000537164 KDM1BQ8NB78 822 aa17.78■□□□□ 0.44
SFSWAP-205ENST00000537164 MYO19Q96H55 970 aa17.78■□□□□ 0.44
SFSWAP-205ENST00000537164 VPS45Q9NRW7 570 aa17.78■□□□□ 0.44
SFSWAP-205ENST00000537164 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.78■□□□□ 0.44
SFSWAP-205ENST00000537164 DOCK4Q8N1I0 1966 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 IGHV1OR15-9A0A0B4J2B8 117 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 A0A1B0GVM2 712 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 A0A1W2PQC6 194 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 SYCE3A1L190 88 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 TCAF2A6NFQ2 919 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 SYNCRIPO60506 623 aaKnown RBP17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 ENDOD1O94919 500 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 ASLP04424 464 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 POLR2EP19388 210 aaKnown RBP17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 TFE3P19532 575 aaPredicted RBP17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 RNASE9P60153 205 aaKnown RBP17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 PTP4A2Q12974 167 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 SLC12A1Q13621 1099 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 CDH18Q13634 790 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 ARID5BQ14865 1188 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 RABGAP1LQ5R372 815 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 ACBD5Q5T8D3 534 aaPredicted RBP17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 TRNP1Q6NT89 227 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 FBXL22Q6P050 247 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 LPCAT2Q7L5N7 544 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 CCDC117Q8IWD4 279 aaPredicted RBP17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 CARNMT1Q8N4J0 409 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 RNF34Q969K3 372 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 PCDHB18PQ96TA0 734 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 WDCPQ9H6R7 721 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 PRDM16Q9HAZ2 1276 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 ITM2CQ9NQX7 267 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 KIAA1522Q9P206 1035 aaPredicted RBP17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 USP36Q9P275 1121 aaKnown RBP17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 PAXBP1Q9Y5B6 917 aa17.77■□□□□ 0.44
SFSWAP-205ENST00000537164 GON4LQ3T8J9 2241 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 SYNJ2BP-COX16A0A087WUM0 186 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 I6L893 689 aaPredicted RBP17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 AP5Z1O43299 807 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 PAGE1O75459 146 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 CAVIN2O95810 425 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 IGLV3-19P01714 112 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 EPHX1P07099 455 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 PI4KAP42356 2102 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 SULT1E1P49888 294 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 PLK1P53350 603 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 AUHQ13825 339 aaKnown RBP17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 PUM1Q14671 1186 aaKnown RBP eCLIP17.76■□□□□ 0.431e-6■□□□□ 10.1
SFSWAP-205ENST00000537164 RSPO4Q2I0M5 234 aaPredicted RBP17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 CLEC16AQ2KHT3 1053 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 FILIP1LQ4L180 1135 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 PEAR1Q5VY43 1037 aaPredicted RBP17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 MMS22LQ6ZRQ5 1243 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 IRF2BP2Q7Z5L9 587 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 PHF13Q86YI8 300 aaPredicted RBP17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 CCAR2Q8N163 923 aaKnown RBP17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 CYB5D2Q8WUJ1 264 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 BAP1Q92560 729 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 C1orf74Q96LT6 269 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 TBCBQ99426 244 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 SYT11Q9BT88 431 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 SLC6A17Q9H1V8 727 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 FBRSQ9HAH7 460 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 ANLNQ9NQW6 1124 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 COX16Q9P0S2 106 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 HS3ST4Q9Y661 456 aa17.76■□□□□ 0.43
SFSWAP-205ENST00000537164 NYNRINQ9P2P1 1898 aaKnown RBP17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 H0Y626 953 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 MAP3K13O43283 966 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 ADCY5O95622 1261 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 CCDC172P0C7W6 258 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 FERP16591 822 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 CSKP41240 450 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 DPP6P42658 865 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 LIMK1P53667 647 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 OXCT1P55809 520 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 CREB5Q02930 508 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 DEUP1Q05D60 604 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 NR1I3Q14994 352 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 SF3A2Q15428 464 aaKnown RBP17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 PLEKHG6Q3KR16 790 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 FNDC3BQ53EP0 1204 aaKnown RBP17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 PITRM1Q5JRX3 1037 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 CXorf57Q6NSI4 855 aaKnown RBP17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 SND1Q7KZF4 910 aaKnown RBP eCLIP17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 TMPRSS6Q8IU80 811 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 ZNF683Q8IZ20 524 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 OR2T3Q8NH03 318 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 SLC30A5Q8TAD4 765 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 NETO1Q8TDF5 533 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 IGSF8Q969P0 613 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 MRGPRX3Q96LB0 322 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 NAP1L5Q96NT1 182 aaPredicted RBP17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 AGPAT1Q99943 283 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 TKTL2Q9H0I9 626 aa17.75■□□□□ 0.43
SFSWAP-205ENST00000537164 ITIH6Q6UXX5 1313 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 229.1 ms