RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 NOBOXO60393 691 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 TNFSF15O95150 251 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 DLATP10515 647 aaKnown RBP14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 RALAP11233 206 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 GAP43P17677 238 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 TNNI1P19237 187 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 SLC8A1P32418 973 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 HARS2P49590 506 aaKnown RBP14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 HMGN5P82970 282 aaKnown RBP14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 TBR1Q16650 682 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 HNRNPA1L2Q32P51 320 aaKnown RBP14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 CLEC20AQ6ZU45 233 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 SND1Q7KZF4 910 aaKnown RBP eCLIP14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 WDR36Q8NI36 951 aaKnown RBP14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 IFI44Q8TCB0 444 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 CDK5RAP1Q96SZ6 601 aaKnown RBP14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 SDCBP2Q9H190 292 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 CAAP1Q9H8G2 361 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 USP29Q9HBJ7 922 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 OLFML3Q9NRN5 406 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 WDR70Q9NW82 654 aa14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 GEMIN8Q9NWZ8 242 aaKnown RBP14.46□□□□□ -0.09
NKX3-1-202ENST00000523261 CENPBP07199 599 aaPredicted RBP14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 ITGA2BP08514 1039 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 FAM200BP0CF97 657 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 THEGLP0DJG4 465 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 GOT1P17174 413 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 ATICP31939 592 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 KIF11P52732 1056 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 CACNA1DQ01668 2161 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 ALCAMQ13740 583 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 SKIDA1Q1XH10 827 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 CCDC186Q7Z3E2 898 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 PRPF39Q86UA1 669 aaKnown RBP14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 C12orf29Q8N999 325 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 FAM184AQ8NB25 1140 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 RASSF8Q8NHQ8 419 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 WFDC5Q8TCV5 224 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 DNAJC19Q96DA6 116 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 CGRRF1Q99675 332 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 LRRC4CQ9HCJ2 640 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 FAM49BQ9NUQ9 324 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 NLGN3Q9NZ94 848 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 KIF3AQ9Y496 699 aa14.45□□□□□ -0.1
NKX3-1-202ENST00000523261 LRBAP50851 2863 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 TBC1D3DA0A087WVF3 549 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 TBC1D3IA0A087WXS9 549 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 TBC1D3EA0A087X179 549 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 TBC1D3KA0A087X1G2 549 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 TBC1D3FA6NER0 549 aaPredicted RBP14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 TBC1D3LB9A6J9 549 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 PIAS2O75928 621 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 TBC1D3HP0C7X1 549 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 ALPPL2P10696 532 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 POLR2EP19388 210 aaKnown RBP14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 CD70P32970 193 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 NEK4P51957 841 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 TRPC3Q13507 836 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 STAT4Q14765 748 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 CLCA4Q14CN2 919 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 TGIF1Q15583 401 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 BMT2Q1RMZ1 405 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 C9orf64Q5T6V5 341 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 TBC1D3GQ6DHY5 549 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 TBC1D3CQ6IPX1 549 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 SCARA5Q6ZMJ2 495 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 PTRH1Q86Y79 214 aaKnown RBP14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 TBC1D3Q8IZP1 549 aaPredicted RBP14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 CRYBG2Q8N1P7 616 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 ZNF564Q8TBZ8 553 aaPredicted RBP14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 ZNF516Q92618 1163 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 SYAP1Q96A49 352 aaPredicted RBP14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 VRTNQ9H8Y1 702 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 PNPLA8Q9NP80 782 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 KLHL11Q9NVR0 708 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 MARCH2Q9P0N8 246 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 HMGXB4Q9UGU5 601 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 CYTH4Q9UIA0 394 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 DMTF1Q9Y222 760 aa14.44□□□□□ -0.1
NKX3-1-202ENST00000523261 SLC12A8A0AV02 714 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 ADORA2BP29275 332 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 MAT2AP31153 395 aaKnown RBP14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 NUDT1P36639 197 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 PSMD8P48556 350 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 ARID5BQ14865 1188 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 PSMD6Q15008 389 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 RBM44Q6ZP01 1051 aaKnown RBP14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 ARRDC3Q96B67 414 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 TMA16Q96EY4 203 aaKnown RBP14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 KLHDC7BQ96G42 594 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 LIN37Q96GY3 246 aaPredicted RBP14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 MRGPRX3Q96LB0 322 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 FAM129BQ96TA1 746 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 KIAA1586Q9HCI6 787 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 EVA1BQ9NVM1 165 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 PLEKHB1Q9UF11 243 aaPredicted RBP14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 CA5BQ9Y2D0 317 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 USP3Q9Y6I4 520 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 RP1P56715 2156 aa14.43□□□□□ -0.1
NKX3-1-202ENST00000523261 NYNRINQ9P2P1 1898 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 443.8 ms