RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 GPATCH8Q9UKJ3 1502 aaKnown RBP4.2□□□□□ -1.74
HDAC2-208ENST00000520746 KIAA1107Q9UPP5 1409 aa4.2□□□□□ -1.74
HDAC2-208ENST00000520746 CLTCQ00610 1675 aaKnown RBP4.19□□□□□ -1.74
HDAC2-208ENST00000520746 SAMD9LQ8IVG5 1584 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 CEP170BQ9Y4F5 1589 aaPredicted RBP4.19□□□□□ -1.74
HDAC2-208ENST00000520746 TCOF1Q13428 1488 aaKnown RBP4.19□□□□□ -1.74
HDAC2-208ENST00000520746 hCG_1642624A0A1W2PR95 340 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 SYT5O00445 386 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 IFRD1O00458 451 aaPredicted RBP4.19□□□□□ -1.74
HDAC2-208ENST00000520746 NBNO60934 754 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 TAF5LO75529 589 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 ITGA5P08648 1049 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 GYS1P13807 737 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 KLRK1P26718 216 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 AKT1P31749 480 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 SERPINF1P36955 418 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 HTR6P50406 440 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 RENBPP51606 427 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 CCDC15Q0P6D6 951 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 DNASE1L3Q13609 305 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 KCNJ12Q14500 433 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 ZNF268Q14587 947 aaPredicted RBP4.19□□□□□ -1.74
HDAC2-208ENST00000520746 LEXMQ3ZCV2 418 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 ANO1Q5XXA6 986 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 CCDC144NLQ6NUI1 221 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 ERAP2Q6P179 960 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 ZNF813Q6ZN06 617 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 PIK3AP1Q6ZUJ8 805 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 KRT27Q7Z3Y8 459 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 BCDIN3DQ7Z5W3 292 aaKnown RBP4.19□□□□□ -1.74
HDAC2-208ENST00000520746 NRSN1Q8IZ57 195 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 MYCT1Q8N699 235 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 C12orf76Q8N812 135 aaPredicted RBP4.19□□□□□ -1.74
HDAC2-208ENST00000520746 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.19□□□□□ -1.74
HDAC2-208ENST00000520746 MORC4Q8TE76 937 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 CCDC17Q96LX7 622 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 HS6ST2Q96MM7 605 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 SNX18Q96RF0 628 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 CINPQ9BW66 212 aaPredicted RBP4.19□□□□□ -1.74
HDAC2-208ENST00000520746 PPCSQ9HAB8 311 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 VPS45Q9NRW7 570 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 RRP7BPQ9NSQ0 103 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 ABCC1P33527 1531 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 ATP7AQ04656 1500 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 REREQ9P2R6 1566 aa4.19□□□□□ -1.74
HDAC2-208ENST00000520746 KIDINS220Q9ULH0 1771 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.18□□□□□ -1.74
HDAC2-208ENST00000520746 CD8B2A6NJW9 211 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 UBE2Q2LH0YL09 131 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 ACKR2O00590 384 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 DSCR3O14972 297 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 DHHO43323 396 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 PRAMEF2O60811 474 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 GCATO75600 419 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 MT-CO3P00414 261 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 ITGA2BP08514 1039 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 TMIGD3P0DMS9 266 aaPredicted RBP4.18□□□□□ -1.74
HDAC2-208ENST00000520746 ALADP13716 330 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 APEHP13798 732 aaKnown RBP4.18□□□□□ -1.74
HDAC2-208ENST00000520746 MMP8P22894 467 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 HOXD9P28356 352 aaPredicted RBP4.18□□□□□ -1.74
HDAC2-208ENST00000520746 GPC5P78333 572 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 CFHR3Q02985 330 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 FAM90A2PQ658T7 463 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 ZNF772Q68DY9 489 aaPredicted RBP4.18□□□□□ -1.74
HDAC2-208ENST00000520746 MSANTD2Q6P1R3 559 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 KLHL17Q6TDP4 642 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 C9orf47Q6ZRZ4 202 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 PIP4P1Q86T03 277 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 CACNA2D3Q8IZS8 1091 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 CLASRPQ8N2M8 674 aaKnown RBP4.18□□□□□ -1.74
HDAC2-208ENST00000520746 RBMXL3Q8N7X1 1067 aaKnown RBP4.18□□□□□ -1.74
HDAC2-208ENST00000520746 MAFAQ8NHW3 353 aaPredicted RBP4.18□□□□□ -1.74
HDAC2-208ENST00000520746 WDR60Q8WVS4 1066 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 OVCA2Q8WZ82 227 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 CCT6BQ92526 530 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 EDC3Q96F86 508 aaKnown RBP4.18□□□□□ -1.74
HDAC2-208ENST00000520746 LYZL4Q96KX0 146 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 KATNAL1Q9BW62 490 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 FOXP1Q9H334 677 aaPredicted RBP4.18□□□□□ -1.74
HDAC2-208ENST00000520746 TP63Q9H3D4 680 aaPredicted RBP4.18□□□□□ -1.74
HDAC2-208ENST00000520746 ASIC5Q9NY37 505 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 GRHPRQ9UBQ7 328 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 HERC5Q9UII4 1024 aaKnown RBP4.18□□□□□ -1.74
HDAC2-208ENST00000520746 PCDHB7Q9Y5E2 793 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 UGGT1Q9NYU2 1555 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 CDC42BPBQ9Y5S2 1711 aa4.18□□□□□ -1.74
HDAC2-208ENST00000520746 KANK1Q14678 1352 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 TCRBV5S1A1TA0A578 114 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 FYB1O15117 783 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 CTIFO43310 598 aaKnown RBP4.17□□□□□ -1.74
HDAC2-208ENST00000520746 CER1O95813 267 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 GALNSP34059 522 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 IGHMBP2P38935 993 aaKnown RBP4.17□□□□□ -1.74
HDAC2-208ENST00000520746 ERV3-1Q14264 604 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 MFSD13AQ14CX5 517 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 FAM187BQ17R55 369 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 BTBD16Q32M84 506 aa4.17□□□□□ -1.74
HDAC2-208ENST00000520746 ATPAF1Q5TC12 328 aaPredicted RBP4.17□□□□□ -1.74
HDAC2-208ENST00000520746 SULT6B1Q6IMI4 303 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms