RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 SEMA4GQ9NTN9 838 aa13.04□□□□□ -0.32
PPP1R3F-204ENST00000471261 TMEM59LQ9UK28 342 aa13.04□□□□□ -0.32
PPP1R3F-204ENST00000471261 VANGL2Q9ULK5 521 aa13.04□□□□□ -0.32
PPP1R3F-204ENST00000471261 PAXBP1Q9Y5B6 917 aa13.04□□□□□ -0.32
PPP1R3F-204ENST00000471261 HS3ST4Q9Y661 456 aa13.04□□□□□ -0.32
PPP1R3F-204ENST00000471261 MYO18AQ92614 2054 aaKnown RBP13.04□□□□□ -0.32
PPP1R3F-204ENST00000471261 SDK1Q7Z5N4 2213 aa13.04□□□□□ -0.32
PPP1R3F-204ENST00000471261 MOCS3O95396 460 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 GJB6O95452 261 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 ADCY5O95622 1261 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 CALB1P05937 261 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 DLDP09622 509 aaKnown RBP13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 RDXP35241 583 aaKnown RBP13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 P2RY2P41231 377 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 CSKP41240 450 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 DHPSP49366 369 aaPredicted RBP13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 CXCR3P49682 368 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 UBASH3AP57075 661 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 MTA1Q13330 715 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 ASIC2Q16515 512 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 CDO1Q16878 200 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 BRMS1LQ5PSV4 323 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 TTC39BQ5VTQ0 682 aaPredicted RBP13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 SFMBT2Q5VUG0 894 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 RNF43Q68DV7 783 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 TRNP1Q6NT89 227 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 ARMCX6Q7L4S7 300 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 LPCAT2Q7L5N7 544 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 KIAA0907Q7Z7F0 614 aaPredicted RBP13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 IGSF8Q969P0 613 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 NT5C3BQ969T7 300 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 LOXL4Q96JB6 756 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 MRGPRX1Q96LB2 322 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 PRMT1Q99873 361 aaKnown RBP13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 PRDM16Q9HAZ2 1276 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 CD248Q9HCU0 757 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 MYO6Q9UM54 1294 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 CYP8B1Q9UNU6 501 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 SNX10Q9Y5X0 201 aa13.03□□□□□ -0.32
PPP1R3F-204ENST00000471261 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 A0A1B0GVM2 712 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 TCAF2A6NFQ2 919 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 TMCO5BA8MYB1 307 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 LRP3O75074 770 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 EPN2O95208 641 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 KRT3P12035 628 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 PDGFRAP16234 1089 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 TNFAIP3P21580 790 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 SDC4P31431 198 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 MPLP40238 635 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 ST8SIA6P61647 398 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 ZNF177Q13360 481 aaPredicted RBP13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 ENPP2Q13822 863 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 PTPRNQ16849 979 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 C15orf59Q2T9L4 293 aaPredicted RBP13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 MAP7D1Q3KQU3 841 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 PITRM1Q5JRX3 1037 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 PMS2CLQ68D20 193 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 IRF2BP2Q7Z5L9 587 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 C14orf80Q86SX3 495 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 FAM131BQ86XD5 332 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 PHF13Q86YI8 300 aaPredicted RBP13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 TMPRSS6Q8IU80 811 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 TMEFF1Q8IYR6 380 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 CCAR2Q8N163 923 aaKnown RBP13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 DEFB119Q8N690 84 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 RXFP2Q8WXD0 754 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 PGAP3Q96FM1 320 aaPredicted RBP13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 LMLNQ96KR4 655 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 SELENOOQ9BVL4 669 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 MKRN2Q9H000 416 aaKnown RBP13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 SMOC1Q9H4F8 434 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 ANLNQ9NQW6 1124 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 TMPRSS4Q9NRS4 437 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 ARHGEF38Q9NXL2 777 aa13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 KIAA1522Q9P206 1035 aaPredicted RBP13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 MBD1Q9UIS9 605 aaPredicted RBP13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 INTS6Q9UL03 887 aaKnown RBP13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.02□□□□□ -0.33
PPP1R3F-204ENST00000471261 ANKRD62A6NC57 917 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 SRGAP2O75044 1071 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 ZNF217O75362 1048 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 ACADMP11310 421 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 TGM1P22735 817 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 CTSOP43234 321 aaPredicted RBP13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 IRAK1P51617 712 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 RPL6Q02878 288 aaKnown RBP13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 LMNB2Q03252 620 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 C1QBPQ07021 282 aaKnown RBP13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 CSRP2Q16527 193 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 CCDC14Q49A88 953 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 RNF219Q5W0B1 726 aaPredicted RBP13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 DNAJC24Q6P3W2 148 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 LRRC31Q6UY01 552 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 PRR23CQ6ZRP0 262 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 MON1BQ7L1V2 547 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 ARCQ7LC44 396 aa13.01□□□□□ -0.33
PPP1R3F-204ENST00000471261 CYP2U1Q7Z449 544 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms