RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 RTKN2Q8IZC4 609 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 RNF148Q8N7C7 305 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 QKIQ96PU8 341 aaKnown RBP eCLIP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 CAB39LQ9H9S4 337 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 HACL1Q9UJ83 578 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 BARX2Q9UMQ3 279 aaPredicted RBP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 HES2Q9Y543 173 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 VILLO15195 856 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 DGKIO75912 1065 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 CNTFP26441 200 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 MRPS22P82650 360 aaKnown RBP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 RBM44Q6ZP01 1051 aaKnown RBP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 COLGALT1Q8NBJ5 622 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 SEPT1Q8WYJ6 367 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 WDR55Q9H6Y2 383 aaPredicted RBP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 DCDC2Q9UHG0 476 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 APPL1Q9UKG1 709 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 AP4E1Q9UPM8 1137 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 A0A0G2JMZ2 1700 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 LRRC37A2A6NM11 1700 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 SOWAHBA6NEL2 793 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 DPYSL4O14531 572 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 MDM4O15151 490 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 DNAJA2O60884 412 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 FBXO21O94952 628 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 LTFP02788 710 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 TFAP2AP05549 437 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 ATP6V1B1P15313 513 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 PHKA2P46019 1235 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 HARS2P49590 506 aaKnown RBP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 NUDT2P50583 147 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 SLC6A3Q01959 620 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 SLC10A6Q3KNW5 377 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 PABPC1LQ4VXU2 614 aaKnown RBP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 LRRC23Q53EV4 343 aaPredicted RBP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 STXBP5Q5T5C0 1151 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 TP53INP2Q8IXH6 220 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 ACMSDQ8TDX5 336 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 HTR3CQ8WXA8 447 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 ATP2A3Q93084 1043 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 PRICKLE1Q96MT3 831 aaPredicted RBP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 FCRL3Q96P31 734 aaPredicted RBP12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 CSPG4P5Q96PW8 444 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 SNX15Q9NRS6 342 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 SEPT10Q9P0V9 454 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 ARHGAP26Q9UNA1 814 aa12.04□□□□□ -0.48
PDZRN3-203ENST00000462146 SSC5DA1L4H1 1573 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 IGKV6-21A0A0C4DH24 114 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 MFSD11O43934 449 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 IL18RAPO95256 599 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 CHRNGP07510 517 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 CPA3P15088 417 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 PSMB4P28070 264 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 EPGNQ6UW88 154 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 PQLC1Q8N2U9 271 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 DCLK2Q8N568 766 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 ACVR1CQ8NER5 493 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 USP13Q92995 863 aaPredicted RBP12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 CNBD2Q96M20 576 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 MRPL45Q9BRJ2 306 aaKnown RBP12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 GRIP2Q9C0E4 1043 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 CDH19Q9H159 772 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 PICK1Q9NRD5 415 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 RNF19AQ9NV58 838 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 SHROOM3Q8TF72 1996 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 A0A1B0GTW7 788 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 PPEF2O14830 753 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 USP12O75317 370 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 HSPA4LO95757 839 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 XRCC1P18887 633 aaPredicted RBP12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 THOP1P52888 689 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 PKNOX1P55347 436 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 IGBP1P78318 339 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 TNFAIP1Q13829 316 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 NADK2Q4G0N4 442 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 EFCAB12Q6NXP0 572 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 FAM81AQ8TBF8 368 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 CDKL2Q92772 493 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 COPS5Q92905 334 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 MARK4Q96L34 752 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 AGAP2Q99490 1192 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 C2orf40Q9H1Z8 148 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 SSX2IPQ9Y2D8 614 aa12.03□□□□□ -0.48
PDZRN3-203ENST00000462146 WDR90Q96KV7 1748 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 CCDC160A6NGH7 325 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 CRTAMO95727 393 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 GRK2P25098 689 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 MPSTP25325 297 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 XIAPP98170 497 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 INCA1Q0VD86 236 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 ITGA7Q13683 1181 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 R3HDM1Q15032 1099 aaKnown RBP12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 DPYSL2Q16555 572 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 DBN1Q16643 649 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 SOWAHAQ2M3V2 549 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 SDCCAG8Q86SQ7 713 aaPredicted RBP12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 SNX32Q86XE0 403 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 LILRA2Q8N149 483 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 DNERQ8NFT8 737 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms