RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 PGM5Q15124 567 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 ZFP1Q6P2D0 407 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 XKR5Q6UX68 686 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 ALDH16A1Q8IZ83 802 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 APBB2Q92870 758 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 RMND5BQ96G75 393 aaPredicted RBP14.3□□□□□ -0.12
VPS52-212ENST00000445902 PIWIL1Q96J94 861 aaKnown RBP14.3□□□□□ -0.12
VPS52-212ENST00000445902 SLC29A1Q99808 456 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 C20orf96Q9NUD7 363 aaPredicted RBP14.3□□□□□ -0.12
VPS52-212ENST00000445902 ADA2Q9NZK5 511 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 MYRFQ9Y2G1 1151 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 WDR37Q9Y2I8 494 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 K7ERI5 159 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 SEC24DO94855 1032 aaPredicted RBP14.29□□□□□ -0.12
VPS52-212ENST00000445902 ALOX15P16050 662 aaPredicted RBP14.29□□□□□ -0.12
VPS52-212ENST00000445902 ME2P23368 584 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 ALDH3B2P48448 385 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 HSPA13P48723 471 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 GTF2A2P52657 109 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 PFKPQ01813 784 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 ART3Q13508 389 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 CROCCP3Q8IVE0 287 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 SP8Q8IXZ3 490 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 LZTR1Q8N653 840 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 SYTL5Q8TDW5 730 aaPredicted RBP14.29□□□□□ -0.12
VPS52-212ENST00000445902 CLEC4DQ8WXI8 215 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 C12orf43Q96C57 262 aaKnown RBP14.29□□□□□ -0.12
VPS52-212ENST00000445902 RNF157Q96PX1 679 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 ADPGKQ9BRR6 497 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 TCHPQ9BT92 498 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 ZNF518BQ9C0D4 1074 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
VPS52-212ENST00000445902 PRPF19Q9UMS4 504 aaKnown RBP14.29□□□□□ -0.12
VPS52-212ENST00000445902 PCDHA10Q9Y5I2 948 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 SNX13Q9Y5W8 968 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 KIAA1217Q5T5P2 1943 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 KANSL1LA0AUZ9 987 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 ETFBP38117 255 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 PHKA2P46019 1235 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 HARS2P49590 506 aaKnown RBP14.29□□□□□ -0.12
VPS52-212ENST00000445902 PGGT1BP53609 377 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 MAPK10P53779 464 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 TFAMQ00059 246 aaKnown RBP14.29□□□□□ -0.12
VPS52-212ENST00000445902 TGFBIQ15582 683 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 ADRM1Q16186 407 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 ISOC1Q96CN7 298 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 NIF3L1Q9GZT8 377 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 OLAHQ9NV23 265 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 DCDC2Q9UHG0 476 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 HES2Q9Y543 173 aa14.29□□□□□ -0.12
VPS52-212ENST00000445902 CLRN2A0PK11 232 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 RGSL1A5PLK6 1076 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 H3BNH8 94 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 FBP2O00757 339 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 SERPINB7O75635 380 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 ERVK-10P10266 1014 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 YWHAEP62258 255 aaKnown RBP14.28□□□□□ -0.12
VPS52-212ENST00000445902 RPS6P62753 249 aaKnown RBP14.28□□□□□ -0.12
VPS52-212ENST00000445902 KRT76Q01546 638 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 PRKCEQ02156 737 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 TFDP2Q14188 446 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 LSM12Q3MHD2 195 aaKnown RBP14.28□□□□□ -0.12
VPS52-212ENST00000445902 MTX3Q5HYI7 312 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 TRNP1Q6NT89 227 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 TIFABQ6ZNK6 161 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 PCDH20Q8N6Y1 951 aaKnown RBP14.28□□□□□ -0.12
VPS52-212ENST00000445902 RMDN3Q96TC7 470 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 MAGEB5Q9BZ81 275 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 INO80BQ9C086 356 aaPredicted RBP14.28□□□□□ -0.12
VPS52-212ENST00000445902 COQ6Q9Y2Z9 468 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 CDY2AQ9Y6F7 541 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 CDY1Q9Y6F8 540 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 PTPRFP10586 1907 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 PSMD12O00232 456 aaPredicted RBP14.28□□□□□ -0.12
VPS52-212ENST00000445902 DGAT1O75907 488 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 RAD17O75943 681 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 LTFP02788 710 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 PRDX6P30041 224 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 HALP42357 657 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 OSTNP61366 133 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 IRF9Q00978 393 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 TRPC3Q13507 836 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 LTBP1Q14766 1721 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 STILQ15468 1287 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 DLG2Q15700 870 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 CA9Q16790 459 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 CYP2R1Q6VVX0 501 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 CYP4V2Q6ZWL3 525 aaPredicted RBP14.28□□□□□ -0.12
VPS52-212ENST00000445902 CCDC60Q8IWA6 550 aaPredicted RBP14.28□□□□□ -0.12
VPS52-212ENST00000445902 CDAN1Q8IWY9 1227 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 FAM47BQ8NA70 645 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 DEPTORQ8TB45 409 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 UBA3Q8TBC4 463 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 BIRC8Q96P09 236 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 CEP41Q9BYV8 373 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 FAM96AQ9H5X1 160 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 DHX35Q9H5Z1 703 aaKnown RBP14.28□□□□□ -0.12
VPS52-212ENST00000445902 CAB39LQ9H9S4 337 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 NGRNQ9NPE2 291 aaKnown RBP14.28□□□□□ -0.12
VPS52-212ENST00000445902 SLC38A7Q9NVC3 462 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms