RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 CCDC85BQ15834 202 aaPredicted RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 TUBB8Q3ZCM7 444 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 GRASPQ7Z6J2 395 aaPredicted RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 CARNMT1Q8N4J0 409 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 OTUD6BQ8N6M0 293 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 CLEC4CQ8WTT0 213 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 PYROXD1Q8WU10 500 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 ATP2A3Q93084 1043 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 TTC25Q96NG3 672 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 RNF157Q96PX1 679 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 ZNF670Q9BS34 389 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 C2orf49Q9BVC5 232 aaPredicted RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 PCDH9Q9HC56 1237 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 DRG1Q9Y295 367 aaKnown RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 HCFC2Q9Y5Z7 792 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 CPQQ9Y646 472 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 MAD1L1Q9Y6D9 718 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 GOLGA8MH3BSY2 632 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 MEFVO15553 781 aaPredicted RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 LIASO43766 372 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 ACSL4O60488 711 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 EPCAMP16422 314 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 RPL21P46778 160 aaKnown RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 GSCP56915 257 aaPredicted RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 ADCY2Q08462 1091 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 SMAD4Q13485 552 aaKnown RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 ZC3H12AQ5D1E8 599 aaKnown RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 PPP1R15BQ5SWA1 713 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 KCTD16Q68DU8 428 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 TRMT10CQ7L0Y3 403 aaKnown RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 CNPY4Q8N129 248 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 C12orf50Q8NA57 414 aaPredicted RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 NDRG1Q92597 394 aaKnown RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 TTC1Q99614 292 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 SMOC2Q9H3U7 446 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 DUS2Q9NX74 493 aaKnown RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 THEGQ9P2T0 379 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 CDH7Q9ULB5 785 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 NAALADL1Q9UQQ1 740 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 YBX2Q9Y2T7 364 aaKnown RBP7.46□□□□□ -1.22
LSM8-204ENST00000424702 FAM169AQ9Y6X4 670 aa7.46□□□□□ -1.22
LSM8-204ENST00000424702 A0A1W2PRU2 124 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 LCHNA4D1U4 455 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 RASGRF2O14827 1237 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 RAMP2O60895 175 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 CLDN11O75508 207 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 RGS19P49795 217 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 MRPL58Q14197 206 aaKnown RBP7.45□□□□□ -1.22
LSM8-204ENST00000424702 HIF1AQ16665 826 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 ANKRD20A8PQ5CZ79 823 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 RASIP1Q5U651 963 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 DUPD1Q68J44 220 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 ARCQ7LC44 396 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 MFN1Q8IWA4 741 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 CXorf38Q8TB03 319 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 TFB1MQ8WVM0 346 aaKnown RBP7.45□□□□□ -1.22
LSM8-204ENST00000424702 SMARCD2Q92925 531 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 TRMT61BQ9BVS5 477 aaKnown RBP7.45□□□□□ -1.22
LSM8-204ENST00000424702 TKTL2Q9H0I9 626 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 KCNK9Q9NPC2 374 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 RAB6BQ9NRW1 208 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 PLA2G4CQ9UP65 541 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 E2F8A0AVK6 867 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 GOLGA8CPA6NN73 597 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 MDM4O15151 490 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 SYNCRIPO60506 623 aaKnown RBP7.45□□□□□ -1.22
LSM8-204ENST00000424702 ABLIM3O94929 683 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 MAP3K6O95382 1288 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 CPP00450 1065 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 ASLP04424 464 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 MYBL2P10244 700 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 KRT15P19012 456 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 AMPD1P23109 780 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 HSPA9P38646 679 aaKnown RBP7.45□□□□□ -1.22
LSM8-204ENST00000424702 MAPK8P45983 427 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 NR2C2P49116 596 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 ERVFC1P60507 584 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 GABPB1Q06547 395 aaPredicted RBP7.45□□□□□ -1.22
LSM8-204ENST00000424702 PDIA2Q13087 525 aaKnown RBP7.45□□□□□ -1.22
LSM8-204ENST00000424702 MMRN1Q13201 1228 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 CYP1B1Q16678 543 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 ACCSLQ4AC99 568 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 GPR153Q6NV75 609 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 PPIL6Q8IXY8 311 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 NTAN1Q96AB6 310 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 PABPC5Q96DU9 382 aaKnown RBP7.45□□□□□ -1.22
LSM8-204ENST00000424702 MSANTD3Q96H12 275 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 RBM15Q96T37 977 aaKnown RBP eCLIP7.45□□□□□ -1.22
LSM8-204ENST00000424702 ZYG11BQ9C0D3 744 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 PCDH18Q9HCL0 1135 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 TDP1Q9NUW8 608 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 SAMD15Q9P1V8 674 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 VPS28Q9UK41 221 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 TLR6Q9Y2C9 796 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 NEU2Q9Y3R4 380 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 TTC3P53804 2025 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 HMGB1P1B2RPK0 211 aaPredicted RBP7.45□□□□□ -1.22
LSM8-204ENST00000424702 MYOGP15173 224 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 TCF4P15884 667 aa7.45□□□□□ -1.22
LSM8-204ENST00000424702 POLR2EP19388 210 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms