RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 DENND2DQ9H6A0 471 aaPredicted RBP17.28■□□□□ 0.36
NUP50-203ENST00000407019 ZNF395Q9H8N7 513 aaPredicted RBP17.28■□□□□ 0.36
NUP50-203ENST00000407019 FAM105AQ9NUU6 356 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 NKX1-2Q9UD57 310 aaPredicted RBP17.28■□□□□ 0.36
NUP50-203ENST00000407019 FBXW11Q9UKB1 542 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 HBS1LQ9Y450 684 aaKnown RBP17.28■□□□□ 0.36
NUP50-203ENST00000407019 KCNK1O00180 336 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 PTPN3P26045 913 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 IRX4P78413 519 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 RAB41Q5JT25 222 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 SPANXN3Q5MJ09 141 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 DSTYKQ6XUX3 929 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 GSTCDQ8NEC7 633 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 ZMIZ2Q8NF64 920 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 PPP1R14CQ8TAE6 165 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 ATP2A3Q93084 1043 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 PGAP3Q96FM1 320 aaPredicted RBP17.28■□□□□ 0.36
NUP50-203ENST00000407019 GAD1Q99259 594 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 ANLNQ9NQW6 1124 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 ZFATQ9P243 1243 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 TXNDC16Q9P2K2 825 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 TRPV2Q9Y5S1 764 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 PTCH2Q9Y6C5 1203 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 CDY2AQ9Y6F7 541 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 MYBPHLA2RUH7 354 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 NCAM2O15394 837 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 LTFP02788 710 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 THP07101 528 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 ITGA2BP08514 1039 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 NCAM1P13591 858 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 HCAR3P49019 387 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 CLCNKBP51801 687 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 CCNG1P51959 295 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 PDE1CQ14123 709 aaPredicted RBP17.27■□□□□ 0.36
NUP50-203ENST00000407019 ARL13BQ3SXY8 428 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 FASTKD1Q53R41 847 aaKnown RBP17.27■□□□□ 0.36
NUP50-203ENST00000407019 N4BP2L1Q5TBK1 243 aaPredicted RBP17.27■□□□□ 0.36
NUP50-203ENST00000407019 ZCCHC23Q6ZST2 131 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 NUDCD1Q96RS6 583 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 KCNK16Q96T55 309 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 THAP1Q9NVV9 213 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 DDIT4Q9NX09 232 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 RRN3Q9NYV6 651 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 MARCOQ9UEW3 520 aaPredicted RBP17.27■□□□□ 0.36
NUP50-203ENST00000407019 DCDC2Q9UHG0 476 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 CDH9Q9ULB4 789 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 EMCNQ9ULC0 261 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 TIMM13Q9Y5L4 95 aaPredicted RBP17.27■□□□□ 0.36
NUP50-203ENST00000407019 PSAT1Q9Y617 370 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 RPS6KL1Q9Y6S9 549 aa17.27■□□□□ 0.36
NUP50-203ENST00000407019 GSC2O15499 205 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 ATP5BP06576 529 aaKnown RBP17.27■□□□□ 0.35
NUP50-203ENST00000407019 USP17L7P0C7H9 530 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 KITP10721 976 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 GP5P40197 560 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 GARSP41250 739 aaKnown RBP17.27■□□□□ 0.35
NUP50-203ENST00000407019 AQP5P55064 265 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 PDE1BQ01064 536 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 PPIDQ08752 370 aaKnown RBP17.27■□□□□ 0.35
NUP50-203ENST00000407019 HSF5Q4G112 596 aaPredicted RBP17.27■□□□□ 0.35
NUP50-203ENST00000407019 C16orf46Q6P387 395 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 C4orf50Q6ZRC1 276 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 RINLQ6ZS11 566 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 ENDOVQ8N8Q3 282 aaKnown RBP17.27■□□□□ 0.35
NUP50-203ENST00000407019 OR52K1Q8NGK4 314 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 CERS2Q96G23 380 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 C20orf27Q9GZN8 174 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 LRRC40Q9H9A6 602 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.27■□□□□ 0.35
NUP50-203ENST00000407019 ARMCX1Q9P291 453 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 PPARGC1AQ9UBK2 798 aaKnown RBP17.27■□□□□ 0.35
NUP50-203ENST00000407019 ST3GAL5Q9UNP4 418 aa17.27■□□□□ 0.35
NUP50-203ENST00000407019 I6L893 689 aaPredicted RBP17.26■□□□□ 0.35
NUP50-203ENST00000407019 AP2A1O95782 977 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 LMNAP02545 664 aaKnown RBP17.26■□□□□ 0.35
NUP50-203ENST00000407019 TPBGLP0DKB5 382 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 ERVK-10P10266 1014 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 GNAZP19086 355 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 RGS2P41220 211 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 CACNA2D1P54289 1103 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 INTS6LQ5JSJ4 861 aaKnown RBP17.26■□□□□ 0.35
NUP50-203ENST00000407019 MBLAC2Q68D91 279 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 SMC1BQ8NDV3 1235 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 TTC8Q8TAM2 541 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 MCUR1Q96AQ8 359 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 SMARCD1Q96GM5 515 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 AGAP3Q96P47 875 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 CPNE1Q99829 537 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 GORASP1Q9BQQ3 440 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 BRD8Q9H0E9 1235 aa17.26■□□□□ 0.35
NUP50-203ENST00000407019 PLIN3O60664 434 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 GSRP00390 522 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 F9P00740 461 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 AMHP03971 560 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 RPL10AP62906 217 aaKnown RBP17.25■□□□□ 0.35
NUP50-203ENST00000407019 RFWD3Q6PCD5 774 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 CES3Q6UWW8 571 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 NPWQ8N729 165 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 C3orf58Q8NDZ4 430 aa17.25■□□□□ 0.35
NUP50-203ENST00000407019 KCNV2Q8TDN2 545 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms