RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 NT5C3BQ969T7 300 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 TMA16Q96EY4 203 aaKnown RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 FRMD8P1Q9BZ68 369 aaPredicted RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 USP44Q9H0E7 712 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 PRDM6Q9NQX0 595 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 EVA1BQ9NVM1 165 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 SMPD3Q9NY59 655 aaPredicted RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 MARCH4Q9P2E8 410 aaPredicted RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 PCDHA11Q9Y5I1 949 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 GPR45Q9Y5Y3 372 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 LYVE1Q9Y5Y7 322 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 BLACEA4D250 179 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 WDR64B1ANS9 1081 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 E9PI62 339 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 H0Y8G0 127 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 CLDN3O15551 220 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 HNRNPRO43390 633 aaKnown RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 DLX3O60479 287 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 ENTPD3O75355 529 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 RBBP9O75884 186 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 PPP1R2P41236 205 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 IL12RB1P42701 662 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 KCNC1P48547 511 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 MECP2P51608 486 aaKnown RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 HSD17B4P51659 736 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 PRAMEP78395 509 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 LRRC23Q53EV4 343 aaPredicted RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 SGO2Q562F6 1265 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 NCAPH2Q6IBW4 605 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 PPP1R2P3Q6NXS1 205 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 ARHGAP22Q7Z5H3 698 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 DSG4Q86SJ6 1040 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 FJX1Q86VR8 437 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 RASGEF1CQ8N431 466 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 CYP2W1Q8TAV3 490 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 SHISA4Q96DD7 197 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 PTPN18Q99952 460 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 USB1Q9BQ65 265 aaKnown RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 MTG1Q9BT17 334 aaPredicted RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 BTBD2Q9BX70 525 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 IKZF4Q9H2S9 585 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 RIBC2Q9H4K1 309 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 PANK3Q9H999 370 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 ELP3Q9H9T3 547 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 IL26Q9NPH9 171 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 TM7SF3Q9NS93 570 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 CENPMQ9NSP4 180 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 BMP2KQ9NSY1 1161 aaPredicted RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 PAQR5Q9NXK6 330 aaPredicted RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 SENP1Q9P0U3 644 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 STX18Q9P2W9 335 aaKnown RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 CHKBQ9Y259 395 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 SLC27A5Q9Y2P5 690 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 TELO2Q9Y4R8 837 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 ERCC6L2Q5T890 1561 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 PXDNLA1KZ92 1463 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 ARHGAP33O14559 1287 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 IDH3BO43837 385 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 CYP1A1P04798 512 aaPredicted RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 LIPFP07098 398 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 CLUP10909 449 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 MTNR1BP49286 362 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 GDI2P50395 445 aaKnown RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 PPARAQ07869 468 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 NONOQ15233 471 aaKnown RBP eCLIP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 PCSK7Q16549 785 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 HSP90AA4PQ58FG1 418 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 CACHD1Q5VU97 1274 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 RNF19BQ6ZMZ0 732 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 HDXQ7Z353 690 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 SYCP3Q8IZU3 236 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 CSGALNACT2Q8N6G5 542 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 ANKFN1Q8N957 763 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 LZICQ8WZA0 190 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 PGM2Q96G03 612 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 MSLNLQ96KJ4 702 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 GDF15Q99988 308 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 SF3B5Q9BWJ5 86 aaKnown RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 HEMGNQ9BXL5 484 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 VPS54Q9P1Q0 977 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 IGSF9Q9P2J2 1179 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 UXTQ9UBK9 157 aaPredicted RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 SLC7A8Q9UHI5 535 aa5.85□□□□□ -1.47
CNGA1-202ENST00000402813 GPC6Q9Y625 555 aaPredicted RBP5.85□□□□□ -1.47
CNGA1-202ENST00000402813 MON2Q7Z3U7 1717 aa5.84□□□□□ -1.47
CNGA1-202ENST00000402813 A0A088AWK7 358 aa5.84□□□□□ -1.47
CNGA1-202ENST00000402813 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.84□□□□□ -1.47
CNGA1-202ENST00000402813 CCDC154A6NI56 674 aa5.84□□□□□ -1.47
CNGA1-202ENST00000402813 SLC15A5A6NIM6 579 aa5.84□□□□□ -1.47
CNGA1-202ENST00000402813 GCOM1H8Y6P7 765 aaPredicted RBP5.84□□□□□ -1.47
CNGA1-202ENST00000402813 NPHS1O60500 1241 aa5.84□□□□□ -1.47
CNGA1-202ENST00000402813 XYLBO75191 536 aa5.84□□□□□ -1.47
CNGA1-202ENST00000402813 NDUFS2O75306 463 aa5.84□□□□□ -1.47
CNGA1-202ENST00000402813 RHBDL1O75783 438 aa5.84□□□□□ -1.47
CNGA1-202ENST00000402813 TMCC1O94876 653 aa5.84□□□□□ -1.47
CNGA1-202ENST00000402813 TNFRSF6BO95407 300 aa5.84□□□□□ -1.47
CNGA1-202ENST00000402813 ITGB3P05106 788 aa5.84□□□□□ -1.47
CNGA1-202ENST00000402813 FESP07332 822 aa5.84□□□□□ -1.47
CNGA1-202ENST00000402813 MYZAPP0CAP1 466 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms