RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 PSTKQ8IV42 348 aaKnown RBP14.38□□□□□ -0.11
SCAF4-202ENST00000399804 LGI2Q8N0V4 545 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 KIF2BQ8N4N8 673 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 SLAIN1Q8ND83 568 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 MTIF3Q9H2K0 278 aaKnown RBP14.38□□□□□ -0.11
SCAF4-202ENST00000399804 VRTNQ9H8Y1 702 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 CCDC22O60826 627 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 RHOCP08134 193 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 NFKB1P19838 968 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 AVPR1AP37288 418 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 SCNN1BP51168 640 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 SLC5A3P53794 718 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 KDSRQ06136 332 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 MORN1Q5T089 497 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 CLEC20AQ6ZU45 233 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 OSTM1Q86WC4 334 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 DQX1Q8TE96 717 aaKnown RBP14.38□□□□□ -0.11
SCAF4-202ENST00000399804 CYLDQ9NQC7 956 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 MPP6Q9NZW5 540 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 TIMM44O43615 452 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 GLRA3O75311 464 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 BGNP21810 368 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 XRCC4Q13426 336 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 ART3Q13508 389 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 MUM1Q2TAK8 710 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 SYPL2Q5VXT5 272 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 DRICH1Q6PGQ1 229 aaPredicted RBP14.38□□□□□ -0.11
SCAF4-202ENST00000399804 ECHDC2Q86YB7 292 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 REM2Q8IYK8 340 aaPredicted RBP14.38□□□□□ -0.11
SCAF4-202ENST00000399804 RSPH1Q8WYR4 309 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 ACSS3Q9H6R3 686 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 ARHGEF4Q9NR80 690 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 GDAP2Q9NXN4 497 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 GNEQ9Y223 722 aaKnown RBP14.38□□□□□ -0.11
SCAF4-202ENST00000399804 TCRBV9S1A1TA0A576 114 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 FOXO6A8MYZ6 492 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 TRDMT1O14717 391 aaKnown RBP14.37□□□□□ -0.11
SCAF4-202ENST00000399804 MFSD11O43934 449 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 SNX2O60749 519 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 VAPBO95292 243 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 ERVK-10P10266 1014 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 MYL2P10916 166 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 PGAM1P18669 254 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 CDH5P33151 784 aaPredicted RBP14.37□□□□□ -0.11
SCAF4-202ENST00000399804 OR1D2P34982 312 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 RPA3P35244 121 aaPredicted RBP14.37□□□□□ -0.11
SCAF4-202ENST00000399804 GP5P40197 560 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 GLRBP48167 497 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 SOX4Q06945 474 aaPredicted RBP14.37□□□□□ -0.11
SCAF4-202ENST00000399804 FSCBQ5H9T9 825 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 RNASEH2BQ5TBB1 312 aaKnown RBP14.37□□□□□ -0.11
SCAF4-202ENST00000399804 ANKS3Q6ZW76 656 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 CARNMT1Q8N4J0 409 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 SLC35B2Q8TB61 432 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 RHOBTB2Q9BYZ6 727 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 AGO3Q9H9G7 860 aaKnown RBP14.37□□□□□ -0.11
SCAF4-202ENST00000399804 BCAP29Q9UHQ4 241 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 CNTN6Q9UQ52 1028 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 SLC30A1Q9Y6M5 507 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 MYO9BQ13459 2157 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 GOLGA8QA0A0J9YX86 632 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 GOLGA8OA6NCC3 632 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 GOLGA8NF8WBI6 632 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 NEMP1O14524 444 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 GFAPP14136 432 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 ATP5C1P36542 298 aaKnown RBP14.37□□□□□ -0.11
SCAF4-202ENST00000399804 ABCG1P45844 678 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 HDAC4P56524 1084 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 GLIS1Q8NBF1 620 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 HIPK4Q8NE63 616 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 DDI1Q8WTU0 396 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 PIWIL1Q96J94 861 aaKnown RBP14.37□□□□□ -0.11
SCAF4-202ENST00000399804 FGD4Q96M96 766 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 SRPK1Q96SB4 655 aaKnown RBP14.37□□□□□ -0.11
SCAF4-202ENST00000399804 VPS28Q9UK41 221 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 PIRO00625 290 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 TM9SF1O15321 606 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 PAGE1O75459 146 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 OLFML1Q6UWY5 402 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 CNPY4Q8N129 248 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 SCAMP5Q8TAC9 235 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 FAM136AQ96C01 138 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 NDFIP2Q9NV92 336 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 CYTH4Q9UIA0 394 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 PCDHB12Q9Y5F1 795 aa14.37□□□□□ -0.11
SCAF4-202ENST00000399804 A0A1W2PQH9 124 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 MAGEB16A2A368 324 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 TXNDC9O14530 226 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 SPTLC1O15269 473 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 CCNB1P14635 433 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 MAP2K2P36507 400 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 PDAP1Q13442 181 aaKnown RBP14.36□□□□□ -0.11
SCAF4-202ENST00000399804 FRA10AC1Q70Z53 315 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 TSPAN17Q96FV3 270 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 EBNA1BP2Q99848 306 aaKnown RBP14.36□□□□□ -0.11
SCAF4-202ENST00000399804 GPR63Q9BZJ6 419 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 ABCF3Q9NUQ8 709 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.36□□□□□ -0.11
SCAF4-202ENST00000399804 ADAMTSL1Q8N6G6 1762 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 CFAP73A6NFT4 308 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms