RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SCAND2PQ9GZW5 306 aaPredicted RBP5.24□□□□□ -1.57
GABPB1-204ENST00000396464 NT5C3AQ9H0P0 336 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 VPS37BQ9H9H4 285 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 ARHGEF3Q9NR81 526 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 GALNT8Q9NY28 637 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 NINJ2Q9NZG7 142 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 MYOTQ9UBF9 498 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 ASH2LQ9UBL3 628 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 PCSK1NQ9UHG2 260 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 ZDHHC8Q9ULC8 765 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 RPTORQ8N122 1335 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 IGSF1Q8N6C5 1336 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 A0A1W2PRV1 198 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 TCRBV5S2A0A599 114 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 SAC3D1A6NKF1 404 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 MYO1GB0I1T2 1018 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 UBXN8O00124 270 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 PSMD14O00487 310 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 WDR46O15213 610 aaKnown RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 UNC5CO95185 931 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 MPIG6BO95866 241 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 LRG1P02750 347 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 DDCP20711 480 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 SAT1P21673 171 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 IL10P22301 178 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 MCM7P33993 719 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 SULT1E1P49888 294 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 SELENOPP49908 381 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 HNMTP50135 292 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 EPHB4P54760 987 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 C21orf58P58505 322 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 HS1BP3Q53T59 392 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 ZRANB3Q5FWF4 1079 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 CCDC183Q5T5S1 534 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 SLFN13Q68D06 897 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 PLAG1Q6DJT9 500 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 ABHD15Q6UXT9 468 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 SYNE3Q6ZMZ3 975 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 RGS9BPQ6ZS82 235 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 RABEPKQ7Z6M1 372 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 FAM217AQ8IXS0 508 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 OR52K2Q8NGK3 314 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 PRPF31Q8WWY3 499 aaKnown RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 ELP4Q96EB1 424 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 CYFIP2Q96F07 1278 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 LENG8Q96PV6 779 aaPredicted RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 POLR3CQ9BUI4 534 aaPredicted RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 INTS2Q9H0H0 1204 aaKnown RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 STN1Q9H668 368 aaKnown RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 TASP1Q9H6P5 420 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 LDAHQ9H6V9 325 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 PLEKHA2Q9HB19 425 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 GIMAP4Q9NUV9 329 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 EXTL2Q9UBQ6 330 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 SLC25A10Q9UBX3 287 aaPredicted RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 ZNF70Q9UC06 446 aaPredicted RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 SLCO3A1Q9UIG8 710 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 CAPN11Q9UMQ6 739 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 PIN4Q9Y237 131 aaKnown RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 GDAQ9Y2T3 454 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 SPAG9O60271 1321 aaKnown RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 EFCAB8A8MWE9 144 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 H7C4K7 107 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 CASQ2O14958 399 aaPredicted RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 TSC22D2O75157 780 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 COQ9O75208 318 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 GPR32O75388 356 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 RPP40O75818 363 aaKnown RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 DNAJB5O75953 348 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 OR2C1O95371 312 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 IFNB1P01574 187 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 AMHP03971 560 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 OPN1MWP04001 364 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 OPN1MW2P0DN77 364 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 OPN1MW3P0DN78 364 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 SELLP14151 372 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 FDPSP14324 419 aaKnown RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 HOXC8P31273 242 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 PBX3P40426 434 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 IL15P40933 162 aaPredicted RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 PIP4K2AP48426 406 aaPredicted RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 NRIP1P48552 1158 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 NPY4RP50391 375 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 CPT1AP50416 773 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 MXI1P50539 228 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 UCP3P55916 312 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 NOMO3P69849 1222 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 GRIN1Q05586 938 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 NFATC3Q12968 1075 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 AIMP2Q13155 320 aaKnown RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 ITGA7Q13683 1181 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 PTK6Q13882 451 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 RCN2Q14257 317 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 KCNAB1Q14722 419 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 CRYMQ14894 314 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 PCLAFQ15004 111 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 ACAP1Q15027 740 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 NRN1LQ496H8 165 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 HSP90B2PQ58FF3 399 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms