RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 FGF10O15520 208 aaPredicted RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 DAB1O75553 588 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 PCDH8O95206 1070 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 EOMESO95936 686 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 RPL22P35268 128 aaKnown RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 ADRA1BP35368 520 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 HOXD13P35453 343 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 AARS2Q5JTZ9 985 aaKnown RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 ZNF662Q6ZS27 426 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 USP6NLQ92738 828 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 CCDC124Q96CT7 223 aaKnown RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 EXOC2Q96KP1 924 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 B3GALT6Q96L58 329 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 VAT1Q99536 393 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 C16orf70Q9BSU1 422 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 UNC93B1Q9H1C4 597 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 MANSC1Q9H8J5 431 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 CYP4F12Q9HCS2 524 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 RNF186Q9NXI6 227 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 GMIPQ9P107 970 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 COG5Q9UP83 839 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 NCF1BA6NI72 391 aaPredicted RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 NCF1CA8MVU1 366 aaPredicted RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 PPEF2O14830 753 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 MYO1DO94832 1006 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 NCF1P14598 390 aaPredicted RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 NDUFV1P49821 464 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 ZNF473Q8WTR7 871 aaKnown RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 SPATA17Q96L03 361 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 ZNF670Q9BS34 389 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 POLR1EQ9GZS1 481 aaKnown RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 RUVBL2Q9Y230 463 aaKnown RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 MYH3P11055 1940 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 A0A0A0MRY4 1105 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 PRPF4O43172 522 aaKnown RBP eCLIP13.42□□□□□ -0.265e-7■■■■□ 22.4
PTPRN2-202ENST00000389416 LRCH4O75427 683 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 CHKAP35790 457 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 AMPD2Q01433 879 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 AGAP9Q5VTM2 703 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 MON1BQ7L1V2 547 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 SPATA13Q96N96 652 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 ACBD6Q9BR61 282 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 PCDH18Q9HCL0 1135 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 KCND1Q9NSA2 647 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 TMEM161AQ9NX61 479 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 NINJ2Q9NZG7 142 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 HMGXB4Q9UGU5 601 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 NOCTQ9UK39 431 aaKnown RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 ACOT9Q9Y305 439 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 TAF1P21675 1872 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 TMCC1O94876 653 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 PYGBP11216 843 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 EDNRBP24530 442 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 CAPRIN1Q14444 709 aaKnown RBP13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 PRSS55Q6UWB4 352 aaPredicted RBP13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 CFAP52Q8N1V2 620 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 CAVIN3Q969G5 261 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 PAWRQ96IZ0 340 aaKnown RBP13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 GPAMQ9HCL2 828 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 ETNK2Q9NVF9 386 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 USP15Q9Y4E8 981 aaPredicted RBP13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 FSCN2O14926 492 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 TKTP29401 623 aaKnown RBP13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 PBLDP30039 288 aaPredicted RBP13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 MAXP61244 160 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 BCL2L1Q07817 233 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 SOWAHAQ2M3V2 549 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 C6orf10Q5SRN2 563 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 ZNF470Q6ECI4 717 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 OR52K1Q8NGK4 314 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 FBXL18Q96ME1 805 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 FAM167BQ9BTA0 163 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 SYNDIG1Q9H7V2 258 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 RAB21Q9UL25 225 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 TBL1XO60907 577 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 PAGE1O75459 146 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 HSPA8P11142 646 aaKnown RBP13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 CCNB1P14635 433 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 ITGB6P18564 788 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 NFKB1P19838 968 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 HDAC4P56524 1084 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 TRIM32Q13049 653 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 CSHL1Q14406 222 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 CNPY4Q8N129 248 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 SPDL1Q96EA4 605 aa13.41□□□□□ -0.26
PTPRN2-202ENST00000389416 CCDC88AQ3V6T2 1871 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 GLRA3O75311 464 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 ENO1P06733 434 aaKnown RBP13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 CHRNB2P17787 502 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 ABCG1P45844 678 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 TBCCQ15814 346 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 PARP6Q2NL67 630 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 SNX31Q8N9S9 440 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 PLEKHO2Q8TD55 490 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 RSPH1Q8WYR4 309 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 FAM161BQ96MY7 647 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 HNRNPABQ99729 332 aaKnown RBP13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 CENPKQ9BS16 269 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 TLE6Q9H808 572 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 TMBIM4Q9HC24 238 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms