RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 RAP1GAPP47736 663 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 CCDC15Q0P6D6 951 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 SYTL3Q4VX76 610 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 ACBD5Q5T8D3 534 aaPredicted RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 DEPDC1Q5TB30 811 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 AADACL2Q6P093 401 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 ANKS3Q6ZW76 656 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 SNX32Q86XE0 403 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 SNX31Q8N9S9 440 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 RPRD1AQ96P16 312 aaPredicted RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 PARK7Q99497 189 aaKnown RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 C9orf16Q9BUW7 83 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 CINPQ9BW66 212 aaPredicted RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 SYBUQ9NX95 663 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 V9GYQ6 96 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 ZMYM2Q9UBW7 1377 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 MRASO14807 208 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 LIN7AO14910 233 aaPredicted RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 GLP2RO95838 553 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 LDLRP01130 860 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 ZSCAN5DPP0CG00 497 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 MGAT1P26572 445 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 RBL1P28749 1068 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 RPL22P35268 128 aaKnown RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 SOX11P35716 441 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 ETFBP38117 255 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 GCLCP48506 637 aaPredicted RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 SLC11A2P49281 568 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 NCALDP61601 193 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 LRRC74AQ0VAA2 488 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 PKN3Q6P5Z2 889 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 AAGABQ6PD74 315 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 GANCQ8TET4 914 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 USP6NLQ92738 828 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 PLEKHA8Q96JA3 519 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 NSMCE2Q96MF7 247 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 FICDQ9BVA6 458 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 CRLS1Q9UJA2 301 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 ADAM28Q9UKQ2 775 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 DSEQ9UL01 958 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 EFR3BQ9Y2G0 817 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 TCHHQ07283 1943 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 DYTNA2CJ06 578 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 WDR27A2RRH5 827 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 SPDYE5A6NIY4 337 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 RNF103O00237 685 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 BIRC5O15392 142 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 PRPF4O43172 522 aaKnown RBP eCLIP8.57□□□□□ -1.04
VPS36-201ENST00000378060 TGFB1I1O43294 461 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 VPS4BO75351 444 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 MICAL2O94851 1124 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 BCL10O95999 233 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 MARCKSL1P49006 195 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 RENBPP51606 427 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 DLG4P78352 724 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 ROR2Q01974 943 aaKnown RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 ARHGEF7Q14155 803 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 FASTKQ14296 549 aaKnown RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 ZACNQ401N2 412 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 SPDYE7PQ495Y7 208 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 FAM98BQ52LJ0 330 aaKnown RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 TCHHL1Q5QJ38 904 aaPredicted RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 C10orf120Q5SQS8 335 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 CCDC81Q6ZN84 652 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 PPP1R10Q96QC0 940 aaKnown RBP8.57□□□□□ -1.04
VPS36-201ENST00000378060 ETNK2Q9NVF9 386 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 RBM22Q9NW64 420 aaKnown RBP eCLIP8.57□□□□□ -1.04
VPS36-201ENST00000378060 COMMD8Q9NX08 183 aa8.57□□□□□ -1.04
VPS36-201ENST00000378060 A0A087WZ62 844 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 B3GAT3O94766 335 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 ALDH1A1P00352 501 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 HOXD10P28358 340 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 DSG3P32926 999 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 CPT1AP50416 773 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 RTP1P59025 263 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 FUT11Q495W5 492 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 SGO1Q5FBB7 561 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 SLC30A10Q6XR72 485 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.56□□□□□ -1.04
VPS36-201ENST00000378060 TMEM161BQ8NDZ6 487 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 MPP4Q96JB8 637 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 FDXACB1Q9BRP7 624 aaPredicted RBP8.56□□□□□ -1.04
VPS36-201ENST00000378060 TTYH3Q9C0H2 523 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 PORCNQ9H237 461 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 NDUFAF1Q9Y375 327 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 DNAH12Q6ZR08 3092 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 A0A0B4J269 797 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 EFCAB14O75071 495 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 CYP1A1P04798 512 aaPredicted RBP8.56□□□□□ -1.04
VPS36-201ENST00000378060 CTSHP09668 335 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 ATP4AP20648 1035 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 YY1P25490 414 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 RPL14P50914 215 aaKnown RBP8.56□□□□□ -1.04
VPS36-201ENST00000378060 HK2P52789 917 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 SOX10P56693 466 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 XIAPP98170 497 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 BST1Q10588 318 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 DCTN2Q13561 401 aaKnown RBP8.56□□□□□ -1.04
VPS36-201ENST00000378060 AMHR2Q16671 573 aa8.56□□□□□ -1.04
VPS36-201ENST00000378060 TJAP1Q5JTD0 557 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms